Gasterosteus aculeatus (three-spined stickleback): 120825976
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Entry
120825976 CDS
T07457
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat02010
ABC transporters
gat04145
Phagosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120825976
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120825976
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120825976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120825976
Enzymes [BR:
gat01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120825976
Transporters [BR:
gat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120825976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_ATPase
AAA_15
RsgA_GTPase
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
120825976
NCBI-ProteinID:
XP_040043803
LinkDB
All DBs
Position
X:1145564..1150553
Genome browser
AA seq
743 aa
AA seq
DB search
MKVKVDQTSDCIDTEGYADDCSCMTTADMAKVTRKGIALVSAVCVDLSLFYAAGLVATRS
VFGHFARLWLHAALRCSALSAVTLLTLGDLNPLLIRVIASHSLLPAVFETGTKALYREET
ECGPSADARCWLVCAAASLVGALFWEITVPDAEDAAAGKEKKQKARVLFLRVLALYKPEY
LLLLGGLLMLTLAVLCEMFIPFYTGRVIDILGTQYRPNEFVSALLFMGLYSLGSSFSAGC
RGGFLMCAISAFTCRIKVQLFGALTRQEIGFFETTKTGEITSRLSKDTTLMGRAVCLNVN
VLLRTFIKTLGMISLMMNLSWKLTFLVLMEVPITSLIQNIYDTHYQRLSLAVHDSMALAN
EVVNEVVSSIHVVRSFNTEKHEARRYDDRLMDTHILKTRQNAVRAVYLLARRLTGLGMQV
VMMYYGRLFIRSGQMTTGNLVSFILYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFEYLDR
KAQVSMEGKLKPDQLTGNVVFRNLSFAYPTYPDKTVLQDFSLELKSGQMTALVGTSGKGK
STCVSLLQRFYEQQDGEILLDNEPLKSYDHRFLHKKIALVSQEPVLFSGSIRDNIAYGLA
ECSLDEIQEAARKANAHDFIMKLEKGYDAEVGEGGGQLSKSQRQQIAIARALVRQPQVLI
LDEITSSLDMTSENKIHQALASCPNQTLLVIAHKLRTIQRADQIVVIDGGRVQERGTHQE
LMELKGSYYRLREELFEEENPAQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaagtggaccaaacctcagactgcatcgacacagaaggttatgcagacgac
tgtagctgcatgacgacagccgatatggcaaaagtaacccgcaaaggcatcgctttggtg
tccgcagtctgcgtggacctgtccttgttttacgcagcgggactggtggcgactcgcagc
gtgtttggacactttgcgcgtctctggctccacgcggctctccgctgctcggcactgagc
gccgtgactctgctcaccctcggagatctcaacccgttgctgatccgcgttatcgcgtcg
cacagtctgctgcccgcggtgtttgagaccggaaccaaagcgctctaccgcgaggagacc
gaatgcggcccgtcggcggatgcgcgctgctggctcgtttgcgccgcagcgtcgctggtc
ggtgcgctgttttgggaaatcaccgtgccggacgcggaagatgctgccgccggtaaagag
aagaaacagaaggccagagtgctgtttttgagagtcctggccttgtacaaacccgaatat
ctgctgctccttggggggctgctgatgctgacgctggcagttttgtgtgagatgttcatc
ccgttctacactggcagagtcatcgacatccttggcactcagtatcggcccaatgaattt
gtatctgcgcttcttttcatgggactatactctctgggcagctcttttagtgcaggctgc
agaggaggtttcttaatgtgcgccatcagcgccttcacgtgcagaattaaagtccagctg
tttggggctttgaccagacaggagattgggttctttgagacaacaaagacaggggaaatc
acatcaaggttgtctaaagacaccaccctgatgggaagagcggtgtgtctcaatgtcaac
gtgctgctgaggacgttcatcaagacgctgggcatgatctccctgatgatgaatctttcc
tggaagctcacattcctggtattgatggaggtgcccatcaccagcctcattcagaacatc
tatgacacacactaccagcggctgtccctggcagtgcacgactccatggctctggcaaat
gaagtcgtgaacgaggtggtgtccagtattcatgtggtacgtagcttcaacacagagaaa
cacgaagcccgtcgttatgacgaccgcttgatggacacacacatcctgaagacgcgccag
aacgctgtcagagctgtttaccttctcgcgcgcaggttgacaggcttaggcatgcaggtg
gtcatgatgtactacggcaggctgttcatccggagtggacagatgaccactggaaacctg
gtttccttcatcctctaccagtcagatcttggagacaacatcaggacactgacctacatc
tttggcgacatgctgaactcggtgggggctgctgggaaagtgtttgagtacctggaccgt
aaagctcaggtcagcatggaggggaaactcaaaccggatcagctgacagggaacgtcgtc
ttccgcaatctcagcttcgcctatccgacttaccccgacaaaacagtactgcaggacttt
tcattggagctgaagtcaggtcagatgacagcgctggtgggaacatctggaaaagggaaa
agcacatgtgtgagtctgctgcagcgcttctatgagcagcaggacggagaaatcctattg
gacaacgaaccactgaaatcctatgaccaccgtttcctccacaagaagattgctttggtg
agccaggagcctgtcctcttctctggctccatcagagacaacatcgcctacgggctcgct
gaatgctcattggatgagatccaggaagcagcacgcaaagccaacgcacacgacttcatc
atgaagctggagaagggctacgatgcagaggtgggtgagggtgggggccaactatctaag
agccagaggcagcagatcgccatcgctcgagctctggtcaggcagccacaggtcctcatt
ctggatgaaataaccagctctctggacatgaccagtgaaaacaagattcaccaggctttg
gccagttgtcctaaccagaccctgctggtgatcgcccacaagctgaggaccatccagagg
gccgatcagattgttgtgatcgatggcggcagagttcaggagcgagggactcaccaggaa
ctgatggagttgaaggggagctactaccgactgagggaggagctctttgaagaggaaaat
ccagcacagtga
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