Gasterosteus aculeatus (three-spined stickleback): 120826046
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Entry
120826046 CDS
T07457
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120826046 (top2b)
03036 Chromosome and associated proteins [BR:
gat03036
]
120826046 (top2b)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120826046 (top2b)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Topoisomerases
120826046 (top2b)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
120826046 (top2b)
Centrosome formation proteins
Centriole proteins
120826046 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
120826046
NCBI-ProteinID:
XP_040043896
UniProt:
G3NZ45
LinkDB
All DBs
Position
X:complement(14410241..14425297)
Genome browser
AA seq
1615 aa
AA seq
DB search
MSNGAAGSGGLAWMEAANGRGDAGKMEDSKKAKAASKLSVERVYQKKTQLEHILLRPDTY
IGTVEPITQQMWVFDEEIGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMNAIKITID
PESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRHSFKQTWQNNMSKTSEPKIKFFDGDDFTCVTFQPDLSKFQMEK
LDKDTVALLTRRAYDVAGSCRGVKVTLNGKKLPVTGFRSYVDLYVKDKLDEMGVVLKVVN
ETVNDRWEVCLTLSEKGFQQIGFVNSIATTKGGRHVDYVVDQIVAKLIEVVKKKNKAGVT
VKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCPLSDKFIRGATNCGIVES
ILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSGECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYEDPESLKS
LRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKNKQESAFY
SIPEFDEWKKNTENFKTWHIKYYKGLGTSTSKEAKEYFADMEKHRISFRYSGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTQARHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPSGDSNLLKFLY
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRLLNHQDPLPMLP
RYKNFKGVIHELGQNQYLVSGEVLVIDRNTIEITELPVRTWTQAYKESVLEPMLQGNDKT
PALIYDYKEYHTDTTVKFVVRLSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGCLK
RYDSVQDILREFYELRLTYYKLRKDWLLGSLGSEAAKLSNQARFVLEKIEGKISIENKTK
RELIRMLVQKGFESDPVIAWSKSQEKAQEEDYRDGNESDGSVDSGSSSGPNFNYILNMPL
WCLSKEKVDDLLKQRDHKRAELNDLQKKQPEDLWKEDLAVFIEELDKVELQEREEQSLGK
AVKLVKGKVGKPKAKKLNLEETMPSPFGRRVEPPTLAIRSDAAKKLSRKKKSDVDPGVKL
EFDEEGLPVEGATGESAAAKPKAPRVKKEKKEPGAPRVRKPPAPKGTPVKKAKKRNPWSE
DESKSDSDAEDIQPVIPRETKSQRASASKPKYTFDFSEEEEEEEEEDAEGEENGGGDDGA
SSPMRSSKDDFPASSETKERHSDHKEDEDDEDNEDSYSAPQQKTTSAAPAAKKKETTSIF
SSKSAFSEKSNDSDGSKSDSDDGVGRGFSTYSSSSAVDKLSQAKKAAAKKPSEAAAKPKK
PPAPKAKKPDKSIWDSDSDTGSKKPAPAPALKGKGRGRKRKGSGSEDEYSPMKKAVKPVG
RKPQKPPSDDEDNDSNGPGATGAASRDRPGRAKKEVKYFVESDNGEEDDFDDMFN
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgccgcaggaagcggaggtctggcgtggatggaggctgcgaatggtcga
ggtgatgctggcaagatggaggattccaagaaggccaaagcggcctccaagttgtccgtg
gagcgagtgtaccagaagaagacccagctggagcacatccttctccgcccggacacgtac
atcggcaccgtggagccgatcactcagcaaatgtgggtttttgatgaagaaataggaatg
aaccagagggagatcacctacgttcctggactgtacaaaatctttgatgaaattcttgtc
aacgcggcagacaacaaacaaagagacaagaacatgaacgcaataaagatcaccattgat
ccagagtccaacaccatttctatctggaacaacggcaaaggaatccctgtggtggagcac
aaggacgagaagatgtacgtgccggctctcattttcggccacctgctcacctcgagcaac
tacgacgatgacgagaaaaaggtcacgggtggaaggaacggctacggcgccaaactctgc
aacatcttcagcaccaagttcacagtggaaaccgcctgcaaggagtacagacacagtttc
aagcagacgtggcagaacaacatgagcaagacgtctgagcccaagatcaagttctttgat
ggggatgatttcacctgcgtgaccttccagccggacctctcgaagttccagatggagaag
ctggacaaggacactgtagcgcttcttactcgcagagcatacgatgtcgctggttcctgc
aggggggtcaaagtcacgctgaacgggaagaaattacctgtgacggggttccgcagctac
gtggatctgtacgtgaaggacaagctggacgagatgggcgtcgtcctgaaggtggtgaac
gagaccgtgaacgaccgctgggaggtttgcctcacgctgagcgagaaggggttccagcag
atcggcttcgtcaacagcatcgccacgaccaagggaggcagacatgttgactatgtggtg
gaccagatagtggccaaactcattgaagtggtgaagaagaagaacaaggccggagtgaca
gtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaacgcactgatcgagaac
cccacatttgactcccagaccaaggagaacatgacactccagaccaagagcttcgggtcc
aagtgccctctctcggacaagttcatcagaggagcaaccaactgcgggatcgttgagagt
atactcaactgggtgaagttcaaagctcagacacagctcaacaagaagtgctcatctgtg
aagtacagcaagatcaaaggcatccccaagctggacgacgccaacgacgccggtggcaaa
cactcgggtgaatgcacactcatcctcaccgagggggactcggccaagtcgctggccgtc
tctgggctgggagtcatcgggcgcgatcgctacggcgtgtttcctctgagggggaagatc
cttaacgtgcgagaggcgacgcacaagcagatcatggaaaatgctgagatcaacaacatc
atcaaaatcgtgggcctccagtacaagaagagctatgaagaccccgagtcactaaagagc
ctgcgctacggcaagatcatgatcatgactgatcaggatcaagacggctcgcatatcaaa
ggtctgctcatcaacttcttccaccacaactggccgtctctactgaaacacacattcctg
gaggagttcatcacacccattgtcaaagtaaccaagaacaagcaggagtcggccttctac
agcattccagagtttgatgagtggaagaaaaacacagagaactttaaaacctggcatata
aagtactacaaaggtttgggaacgagtacaagcaaagaggcaaaggaatactttgccgac
atggagaagcaccgcatttccttcaggtacagcggggccgaggacgacgctgccatcaca
ctggccttcagcaagaagaagacggatgacaggaaagagtggctgacgaacttcatggag
gacagacgccagaggaggatgcacggcctaccagagcaatacctgtatggaactcaggcc
aggcacctctcctacaatgacttcatcaacaaagagctgattctcttctccaactctgac
aacgagagatccatcccgtccttggttgacggtttaaagcccggccagaggaaggtgctg
ttcacctgcttgaagaggaacgacaagagggaagtgaaagtagcacagctggccggctcg
gttgcagagatgtccgcctaccatcacggagagcaagctctcatgatgaccatcgtgaac
ttggcccagaactttgtgggcagtaacaacgtgaacatcctgcagccgctcggtcagttc
ggtactcgcatcaacggaggcaaagacgccgccagcccccgttacatcttcaccatgctc
agtccactcgccaagctgttgttcccgtctggggactccaacctgctcaagttcctgtac
gatgacaaccagaaggtggagccggagtggtacattcccatcatccccatggtgctggtc
aacggagccgagggcatcggaacgggctgggcgtgtaagatccccaactacgacccgcga
gagatcgtcaacaacatcaaccggctgctcaaccaccaggatccgctgccgatgcttccc
aggtacaaaaacttcaaaggggtgattcacgaactgggtcagaaccagtacctggtcagt
ggagaggtgttggtcattgacagaaacaccattgagatcacagagcttcccgttcggact
tggacacaggcgtataaggagtctgtgctggagcccatgctgcagggaaatgacaaaacg
ccagctctcatctacgactacaaggaatatcacacggacacaacggtcaagtttgtggtt
cgcttgtctgaggagaaactggcccaagccgaagcagtcggcctccacaaagtcttcaag
ctgcagtccagcctcacctgcaactccatggtgctgtttgaccacatgggctgtctcaag
aggtacgattcagtccaagacatcctcagggagttctacgagctccgcctgacctactac
aagctgaggaaggactggttactgggcagcctgggatccgaggcggccaaactgagcaac
caggctcgctttgtcctggagaagatcgagggaaaaatatcaatcgagaacaaaaccaaa
cgtgaactgatccgcatgctcgtccagaaaggctttgagtccgatccagtcatagcctgg
tccaagtctcaggaaaaggcccaggaggaagattaccgtgacggaaacgagagcgacggc
tcggtggactcgggctcctcgtcggggccaaacttcaactacatcctcaacatgcctctg
tggtgcctgagtaaagagaaggtggacgacctgctcaaacagagggaccacaagagagcg
gagctgaatgatctccagaagaaacaaccagaggatctgtggaaggaggacttggcagtg
ttcatcgaggagctggataaagtggagctccaggagcgggaggagcagagtttaggaaag
gccgtcaaactggtgaaggggaaggtgggcaaacccaaagcgaagaagctgaacctggag
gagacaatgccctcgccgtttggccgcagggtggagcctccgactctggcaatcagatcc
gacgcggccaagaaactgtcccgaaagaagaagagtgacgtagatcccggcgtgaagttg
gagttcgacgaggaaggtttgcccgtcgagggagcaacaggagaaagcgctgcggccaaa
ccaaaagctccacgtgtcaagaaagagaagaaagaacccggtgctcccagagtgagaaaa
cccccggcacccaaaggtacccccgttaagaaggccaaaaagagaaacccctggtccgag
gacgagtccaagtccgacagcgacgcggaggatatccagcccgtcatccctagagagacc
aagtcccagagggcgtcagcctccaagccgaaatacacgttcgacttctcggaggaggaa
gaggaggaggaggaggaggatgctgagggagaggagaacggcggcggcgacgacggggct
tcttccccgatgaggtcgtctaaagacgactttcccgcctcctccgagaccaaggagcgg
cacagcgaccacaaggaggacgaagacgacgaagataacgaggactcctactcggctccc
caacaaaagaccacgtccgctgcacctgcagctaaaaagaaggagacgaccagcatcttc
tcgtccaagtcggccttctctgaaaaaagcaacgacagtgacgggtccaagtctgacagc
gacgacggcgtcggccgaggcttctcaacctactccagcagctccgccgtcgacaagctg
tcgcaggcaaagaaagcagcagccaagaagccgtccgaagcagctgccaagcctaagaag
ccaccggcaccaaaagcaaagaaacctgataaatccatctgggactctgactccgacacg
ggctccaagaagccagcaccagcaccggctctcaaaggtaaaggcagagggaggaagagg
aagggctcaggctccgaagatgagtacagtccaatgaaaaaagcggtgaaacctgtcggc
agaaaacctcagaagcccccctcagatgacgaggacaacgacagcaacggccccggcgcg
acgggcgcggcgtcccgcgaccggccgggccgggccaagaaggaggtgaagtacttcgtc
gagtcggacaacggggaggaggacgacttcgacgacatgttcaactga
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integrated database retrieval system
