Gasterosteus aculeatus (three-spined stickleback): 120826069
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Entry
120826069 CDS
T07457
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120826069 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120826069 (pex1)
Membrane trafficking [BR:
gat04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120826069 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
RNA_helicase
ABC_tran
AAA_18
NACHT
AAA_28
NPHP3_N
AAA_33
TIP49
AAA_5
Sigma54_activ_2
AAA_24
DUF815
AAA_29
Viral_helicase1
ATPase
RuvB_N
AAA_2
ATP-synt_ab
TsaE
AAA_7
AAA_25
Mg_chelatase
APS_kinase
IstB_IS21
FtsK_SpoIIIE
AAA_23
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
120826069
NCBI-ProteinID:
XP_040043933
UniProt:
A0AAQ4QGZ2
LinkDB
All DBs
Position
X:10348384..10357207
Genome browser
AA seq
1244 aa
AA seq
DB search
MFSNHGIQSVTVVFNNAKNCFLHLSSKLISHLSLSENQALELSWGDGSPVFLSWTQNRSS
CSLDGHDVELCRQMGEKLGLRDGEQGFLRPHHQVSSVHRVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDGHTAIYIQIASLSPSVPYGRLEQFTELVVSPKSRTRIG
PLSGSPVRNSKKQQNTDLSNSSGPSLENTTPVPQIHQWGGIADLKSMLRYLIKGSYDPVN
RLPPLPDIPFLFNDSIYRVCGAPPDSRCTISQISTAVIHLFPWSHEPRVGPTGDQSPVTY
GLLSKVVSPKESRDRAKLAMEKKKNAGLVKVAAGEEVKEEEATVVRVVCHDSEKLTCKES
SHSRGEIHSGRVWIPQPLAMRLNIIQHSTVRIKPVISTIKVASAICLQPLTPLLEEDDDE
IKTAFLGWLHTQSHEPLACLTARSGTILLHGTDAMLEFALTILKPEPKSDPPDQLFSLAS
AVILKENIQVDREPATFPAGNSTTLTPKPELPSLDILGGIDELSRTGFDFISHSLLGSPL
SRELGTTGRGLQGGALLITGAKGSGKSTLSQALCRKAREDLDAHVELLDCKKLQGKRAET
VRQTLQDIFEEAEWKQPSVVLLDDLDHLSGAPTSPEHEHGAEALLQQHIAQSLMDAVDEV
LVHGSLVCLIITSQSEHSLHPSLTEMQGSHFIQGFVHIQPSDQAQRAEILHRLILRKKST
FGETLQTLNLADVAKETEGYTPQDLLLLLERAIHANTVQAGHSDQGVCLSQRDFVQALKG
FTPPSLWGVDLHTPSGVGLERVGGLREVRQQLMDTILLPAKYPILFSNLPIRHRSGILLY
GAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCILFFD
EFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD
KSLYCPPPDLEARAEILKALSAGVALAADVDLEQLAAATEQFTGADLKALLYNAQLEAVH
NSMHAGTTHELTSGSDSDMSLSSMIFPNNSSGSDDSVGEGDPGVGLDQSMILLEPSDLQA
EDGPHYGNVWRIYFGSSFESESLPTSGPNSRCVSGPNSLTHDLTRASAREAGRSLTPAYM
SSLQSGYNELGPEQLDCLQQDVNSIKNNYRRANEARVRVLSVSSQPGLLLRRAHVNSALA
VTRPSLSKADCSRYTKLYEAFDRVEDGKSLNSSTFKAGQRVTLA
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaatcatggcattcaatccgtaactgttgtttttaacaacgcaaaaaactgc
ttcctccatctctcctccaagctgatatcacatctttccctgagcgaaaaccaggctttg
gagttgtcctggggtgatggatctccagtgttcctcagctggactcaaaacagaagctcc
tgcagcctggacggccatgacgtggagctctgtcgacagatgggcgaaaagcttggcctt
agagacggagagcagggcttcctgagaccacatcaccaggtctcatcagtgcatcgagtg
tttgtggagccactgtcatctgatgactgggaaatcttggagctccacagtgctgctctg
gagcagcagctattggatcagatcagagttgtttttcaagatgccgtgtttcctgtctgg
gtggacggccacactgcaatctacatccaaatagcatcactttccccctctgtaccgtat
ggtcgcttggagcagttcacagaactagttgtctctccgaagagccgcactagaatcggc
cccctcagtggttctccagtgcgaaacagcaagaaacagcaaaatacggatctttcgaac
tcctcaggaccatcattggaaaataccactcctgtccctcaaatccaccaatgggggggt
atagctgacctgaagagcatgctacgttatttgataaaaggttcttatgacccagtgaac
aggctaccacctctacctgacatccctttcctcttcaatgactctatttacagagtgtgc
ggtgcacctccagactcccgctgcactataagccaaatctcaaccgctgttattcatttg
tttccttggagccatgagccgagggttggaccaaccggagaccagtcaccagtgacttat
ggtctgctctccaaagttgtctctcctaaagaatcaagggacagagccaagctggctatg
gagaaaaagaagaatgcaggtctggttaaagttgctgcaggagaggaggtgaaagaagag
gaagctacagtggtcagggtggtgtgccatgacagtgagaagctgacgtgcaaggaaagc
agccacagcaggggagagatccacagtggaagagtatggatcccacagcccctggccatg
aggttgaatatcatccaacattcaacggttcgaattaagccagtcatatcaacgatcaaa
gtggcctccgctatttgtctgcagcctcttacaccactgcttgaggaggacgacgacgag
atcaagacagctttcctcggttggctacacactcagagccatgaaccattagcctgtctg
actgcgcggtctggcaccatcctgctacatggaacggatgcaatgttagagtttgcctta
actatacttaaaccggaaccaaagagtgatcctccagaccagctgttttcactcgcatca
gcggttatcctgaaggaaaacatacaggttgacagagagccagcgacattcccagctggg
aattctacaactctaactcccaaaccggaacttccctcacttgatattctaggtgggatt
gatgagcttagtaggactggatttgacttcatctcccacagcctgctgggtagtcccctc
tcaagggagcttggtacaactggacggggactccagggaggagctcttctcatcactggt
gctaaggggagtggaaagagcactctatcccaagccctctgtagaaaagctagagaggat
ctggatgcgcatgttgagctgctggactgcaaaaaactacaaggcaaaagggcagagaca
gtgagacagacgctgcaggatatttttgaagaggccgagtggaagcagccgtccgttgtc
ctacttgatgacctggaccatttgtccggggcaccgacctcaccagagcatgagcatggt
gctgaggcgctgctgcaacagcacattgcgcagagtctgatggatgctgtggatgaggtg
ctggttcacggcagtctggtgtgtctgatcatcaccagccagagcgagcattccctccac
ccctccctgaccgagatgcaggggtcccatttcatccagggctttgtacacatccagcca
tcagaccaggctcagagagctgaaatcctgcaccggctgatacttagaaaaaaaagcaca
tttggtgagaccttacagactctaaacctggcagatgttgccaaagagacagagggatac
acgccacaagacctattactactgttggagcgcgccatccatgccaatactgtacaagca
ggacacagtgaccagggtgtgtgtctgtcgcagagggactttgtgcaggctctgaaggga
ttcacgcccccctcgctgtggggcgtagacctccacaccccaagtggagttggtctggag
agggtgggggggctgagagaagtgcgacagcagctaatggacaccatactgctccctgct
aagtatccaatcctgttctccaatcttccaattcgccatcgctcaggaatattgctgtat
ggagctcctggcacagggaagaccctgctggccagagccgtggccaaagacagtggaatg
aactttatcagcatcaagggacctgaactcctcagcaagtacattggagctagtgagcag
ggagtccgtgacgtcttccagagggcgcaagctgccaagccatgcattcttttcttcgat
gagtttgattctctggctccacgaaggggccacgacagcacaggtgtaacagaccgcgtg
gtgaaccagctcctcacccagctggacggggtggagggactgcagggtgtgtatgtgctt
gcagcaacaagccgtccagatctgattgacccggcgctgctgaggcctggacgcctggac
aagtccctgtactgcccccctcctgacctggaagctcgtgcagagatcctgaaggctctg
agcgccggcgtggccctggccgccgacgtggaccttgagcagctggcagcggcgacggag
cagttcaccggggcagacctgaaggccctgctgtacaatgcacagctagaagccgtccac
aacagcatgcacgctggcacgacacatgagctgacctccggctctgacagcgacatgagc
ctgtcctccatgatcttcccaaacaacagcagcggctcagatgattcagttggggagggg
gacccaggtgtggggctggaccagtcaatgattctcctggagcccagtgatctccaagca
gaagacggaccacattatgggaatgtttggagaatctacttcggaagctcattcgagtca
gagagtttaccgacttcagggccgaactctcgttgcgtctctggaccgaactccttgacc
cacgacttaacaagggcatcggcccgggaggctggacgctcgctcacccctgcctacatg
tcctcccttcagagcgggtacaacgagctcggcccggagcagctggattgcctacaacaa
gacgttaacagcatcaaaaacaactacaggagagccaacgaggcccgtgtgcgcgtgctt
tcggtctccagccagccgggcctgctgctgcgtcgggctcacgtcaactccgctttggct
gtgacgagaccgtctctcagtaaggccgactgcagcagatacacaaaactgtatgaagcc
ttcgaccgtgtagaagatggaaaatctcttaattcatccacatttaaagctggacaacgt
gtgactttagcctga
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