Gasterosteus aculeatus (three-spined stickleback): 120826119
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Entry
120826119 CDS
T07457
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120826119 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120826119 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120826119 (yars1)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120826119 (yars1)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
120826119 (yars1)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class I (A)
120826119 (yars1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120826119 (yars1)
Prokaryotic type
120826119 (yars1)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120826119 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Ub-Mut7C
Motif
Other DBs
NCBI-GeneID:
120826119
NCBI-ProteinID:
XP_040044048
UniProt:
A0AAQ4QDK1
LinkDB
All DBs
Position
X:15043658..15049538
Genome browser
AA seq
537 aa
AA seq
DB search
MRRLCTMADKLSPDEKLHLITRNLQEVLGEEKMKQVLQERELKVYWGTATTGRPHVAYFV
PMSKIADFLKAGCEVTILFADLHAFLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK
LKFVKGTEFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDE
EYLKVDAQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNPMVPGLTGSKMSSSEEESKIDL
LDSAGDVKKKLKKAFCEPGNIDNNGVLSFVKHVVFPLRGEFSIKRDAKWGGDKIYTAFEE
VEKDFAEESVHPGDLKASVEVVLNQLLEPIRKKFESPELRKLTNTAYPDPSKTKGAAKGA
KAATGGGGDDDLAPSRVDIRVGKIISVEKHPDADSLYLEKIDVGEAEPRTVVSGLVAFIS
QEDLQDRLVLVLCNLKPQKMRGIESQAMLLCASIEGDPRRVEPLDPPEGSSPGERVFVEG
YETGKPDDRLNPKKKVWEKVQADLKISDECVAQWRDKRLLTKLGQITCKTLKGGNVS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactctgcaccatggcggacaagctgagtccggatgagaagctccacctcata
actaggaacctccaggaggtcctcggagaggagaagatgaagcaggttcttcaggagagg
gagctgaaggtgtactggggcacggcgaccaccggcagaccccacgtggcttactttgtc
cccatgtccaagatagcagacttcctcaaggccggatgtgaggtcactattctgtttgca
gacctgcacgcctttctagacaacatgaaggccccctgggagctgctggagctcagggtg
aagtactacgaacaggtcatcaaggccatgttggagagcattggtgtgcccctagataaa
ctcaagtttgtcaaaggaactgagttccagctcagcagagagtacactctggatgtgtac
cgtctgtcctccatggtgacggagcatgatgctaagaaggctggagctgaggtggtcaaa
caggtggagcatcccctactgagtggtcttctctacccgggtctgcaggccctggatgag
gagtacttgaaggtggacgcccagtttggaggagttgaccagaggaagatcttcactctg
gcagagaagtacttgccttcacttggctatgctaagcgctcccatctcatgaacccgatg
gtaccaggactgacggggtccaagatgagctcctcagaggaagagtcaaagatcgatctg
ctggactctgctggagatgtgaagaagaagctgaagaaggctttctgtgagccgggcaac
atcgacaacaacggagtcctctccttcgtcaaacatgtggtcttccccctacgcggagag
ttctccatcaaaagagacgccaagtggggcggagacaaaatctacactgcgtttgaggag
gtggagaaggactttgctgaggagtcggtccatccgggagacctgaaggcctctgttgaa
gtagtgctaaaccagctgctagagccaatcaggaagaagtttgagtcgcccgagctccgc
aaactcaccaacaccgcctacccggacccctcaaagacgaaaggagcagcaaagggtgcc
aaggcagcaacaggaggaggaggagatgatgacctggccccctccagagtggacatcagg
gtgggcaagatcatcagcgtggagaagcatccagacgccgactcgctttacctggagaag
atcgacgtgggagaggcggagccgaggacggtggtcagcgggctggtggcttttatttcg
caggaggacctgcaggacagattggtgctggtgttgtgcaacctgaaacctcagaagatg
cgggggatcgagtctcaagccatgctgctctgtgcctctatcgaaggggatcccaggagg
gtggagcctctggaccctccagaggggtcgtccccaggagagcgggtctttgtcgagggg
tatgagaccggcaaaccagacgacagactcaacccaaagaagaaggtgtgggagaaagta
caggccgacctgaagatatcagatgagtgtgttgctcagtggagagacaagcggctgctg
actaaactcggacagatcacatgtaagacgctcaaagggggaaacgtcagctag
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