Gasterosteus aculeatus (three-spined stickleback): 120826162
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Entry
120826162 CDS
T07457
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03320
PPAR signaling pathway
gat04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120826162 (rxrba)
03320 PPAR signaling pathway
120826162 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120826162 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120826162 (rxrba)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120826162 (rxrba)
Nuclear receptors [BR:
gat03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120826162 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
120826162
NCBI-ProteinID:
XP_040044130
UniProt:
A0AAQ4RDJ4
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Position
X:complement(1429336..1447153)
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AA seq
474 aa
AA seq
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MGDSRDSHSPDSSSVSSPPSGQRSPPLGPSAAASMTSLPPITTSRVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPM
LSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQ
YCRYQKCLAMGMKREVAKMNDRSLCFAVQEERQRNREREGEVESTSVVNEEMPVEKILEA
EVAVEQKTELHADGGSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELTLDDQVIL
LRAGWNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDR
VLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLRERVYASLESYCKQKY
PDQLGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtagagattcccacagtccagacagttcgtctgtctcctcccctccctcg
gggcagcgctcgcctccgctgggtccctcagctgcagcttccatgacctcgctgcctccc
atcaccacctctcgggtcaacagccccattagtagcatcggttcccccttttctgtcatc
agctcttcactgggctcgccctgcctacctggcacgccatcagtgggctacggccccatc
agcagcccgcagatcaactcaacagtgtccatgtcggggcttcacgccgtgagcagctcc
gatgacgtgaaacctccgttgggcctgaagcagctgtcgtcccacagcccggggcccatg
ctgtcccagaagcgcctttgttccatctgtggagaccgatcttctggtaagcactacggc
gtgtacagctgtgagggctgtaaaggcttcttcaagcgcacagtgcgcaaagacttgacc
tacacctgtcgggacaataaagactgtatggtggacaagagacagaggaaccgctgccag
tactgccgctaccagaagtgcctggccatgggcatgaagagagaagtggccaagatgaac
gacagatccctttgcttcgctgtccaagaagagcgccagaggaacagggagcgagagggc
gaggtggagtcaacaagtgtggtgaacgaggagatgcccgtggagaagattttggaagcg
gaggtggctgtggagcagaagacggagcttcacgcagacggaggttcaggtggcagctct
cccaacgatccggtgaccaacatctgtcaggccgctgacaagcagctcttcaccctggtg
gagtgggccaagaggatcccgcacttctccgagctgaccctggacgaccaggtcatcctg
ctacgcgcaggctggaatgaactgctgatcgcatccttttcccatcgctccatctctgtg
aaggatgggatcctactggccaccggcctgcatgtgcacaggaacagcgcccacagcgcc
ggcgttggagcaatctttgacagggcgcacaatgccgaggttggggccatatttgacagg
gttctgacggagctggtaagcaagatgagagacatgcagatggacaagacggagctcggc
tgccttcgagccatcatcctcttcaacccagatgccaagggtttgtccagccccagcgag
gtggagctgctgagagagagggtgtacgcgtctctagagtcctactgcaaacagaaatac
cccgatcagctgggcaggtttgcgaagctcctcctccggctcccggcgctgcgctccatt
ggtctaaagtgtctggagcacctgttcttcttcaaactgattggcgacacgcccatcgac
accttcctgatggagatgctggaggccccccaccagctcacctag
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