Gasterosteus aculeatus (three-spined stickleback): 120826225
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Entry
120826225 CDS
T07457
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
gat03083
Polycomb repressive complex
gat04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120826225 (rbbp4)
03083 Polycomb repressive complex
120826225 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120826225 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120826225 (rbbp4)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120826225 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
120826225 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
120826225 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120826225 (rbbp4)
PRC2.2
120826225 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120826225 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120826225 (rbbp4)
Chromatin remodeling factors
NuRD complex
120826225 (rbbp4)
NuRF complex
120826225 (rbbp4)
NuRF complex (fruit fly)
120826225 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120826225
NCBI-ProteinID:
XP_040044257
LinkDB
All DBs
Position
X:complement(15084766..15088860)
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSEVLVFDYTKHPSKPVDASGECHPDLRLRGHQK
EGYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGST
DPEATA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaagtcggagcgttcgatgatgcagtcgaggaaagggtgataaatgag
gagtacaagatctggaagaagaacacccccttcctgtatgacttggttatgacccacgcg
ctggagtggccgagcctcaccgcgcagtggctgcccgacgtctccagaccagaggggaag
gactacagcgtgcaccgactggtgctgggcacccacacgtctgatgagcagaatcacttg
gtcattgccagcgtccagctgcccaacgatgacgcccagtttgaagcttcgcattatgac
agcgaaaaaggagagttcggaggcttcggctcagtgagtggcaagatcgagatagaaatc
aagatcaaccacgaaggagaagtgaaccgtgctcgctacatgccccagaacccctgcatc
attgccaccaagacgcccacctcagaagtgttggtgtttgactacaccaagcacccctcc
aagccagtcgatgcgtcaggagagtgtcaccctgatctgcgtctcagaggccatcaaaaa
gaaggctacggtctctcctggaatccaaacctgtccggctctctcctcagcgcgtcagat
gaccatacaatctgtctgtgggacataagtgccgtgccgaaggaggggaagatagtcgag
gcaaagacgatcttcacgggtcacactgccgtggtggaagacgtctcctggcacttgctt
cacgagtcactctttggatccgtagccgatgaccagaagctcatgatttgggacactcgt
tcgaacaacacctccaaaccgagccacgcagtggacgcgcacacggcagaggtcaactgt
ttgtcattcaacccgtacagcgagttcatcctggcatccggctcggcagacaagaccgtg
gctctgtgggacttaaggaatttgaaactgaagctgcattccttcgagtcacacaaggat
gagatcttccaggtccagtggtctcctcacaatgagaccatcctggcatccagcggaacg
gaccgtcgcctcaacgtctgggacctcagtaaaatcggagaggagcagtcaccagaagat
gcggaggacggtccaccggagcttctgttcatccacggaggccacaccgctaagatctcc
gacttctcctggaatcccaacgagccctgggtcatctgctcggtgtctgaagacaacatt
atgcaagtctggcaaatggccgagaacatctacaacgacgaagacccggagggttcgacg
gaccccgaggccacagcgtaa
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