Gasterosteus aculeatus (three-spined stickleback): 120826298
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Entry
120826298 CDS
T07457
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120826298 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120826298 (snx27a)
Membrane trafficking [BR:
gat04131
]
Protein recycling
Others
Others
120826298 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120826298 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
PDZ_2
VirE3
SNX17_FERM_C
DarA_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
120826298
NCBI-ProteinID:
XP_040044384
UniProt:
A0AAQ4RQL7
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All DBs
Position
X:complement(6660500..6672328)
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AA seq
566 aa
AA seq
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MADAEDDETRSAPPSASRNGPVVGSAGTAGQNAAAGVVNATSGPRMVRIVKSESGYGFNV
RGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQV
VDLIRAGEKELVLAVLSVPAQEADGLEGGDEVQITYDYSDKQAVPISIPTYKHVEQHSER
FVVYNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGL
EEYLERVCSVRVVGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQ
VYQALVMKVGMDSIMASYFALFEVINHSFVRKLVPNEFPHKLYVQNYTSAVPGTCLALRK
WLFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLR
TCKGYNEVSFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDT
DEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNC
SNNEYLPPLETQQKGWRHLGGEIATS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagaagacgacgaaactcggtcggctcccccttcggcatcgcgcaacggt
ccggtcgtcggctctgcgggcaccgcgggccagaacgccgccgccggtgtggtcaacgcc
acgtcgggtccgcggatggtgaggatcgtcaagtccgagtccggctacgggttcaacgtc
cgcggtcaagtgagcgaaggagggcagcttcgcagcatcaacggggagctgtacgctcct
ctccagcacgtcagcgctgttttgcccggaggagcggcggaccgagccgggatttcaaag
ggcgaccggatcctggaagtgaatggggtgagcgtggaaggtgccacccacaagcaggtg
gtggacctcatccgtgcaggggagaaggagctggttctggctgtgctgtcggtcccagct
caggaggccgacggactggaaggaggagacgaggtccaaatcacttatgactacagcgac
aagcaggctgtgcccatctccattcccacgtacaaacacgtagagcagcactcggagagg
tttgtggtgtacaacgtgtacatgtccggtagacagctgtgctcaaagcgctaccgggag
tttgccatcctgcaccagaacctcaagagagaattttctaacttcaacttcccaaagctc
cccggtaaatggcccttctccctgtccgaacagcagctggatgctcgccgcagaggcctg
gaggaatatctcgagcgagtttgctctgtgcgggttgtcggggagagtgacatcatgcag
gagtttctctctgaatcagatgagaactacaatggggtgacggatgtagagctgcggata
gcccttccagacaagaccaccatctccgtcagagtacgcaagaacagcaccaccgatcag
gtgtaccaggcgttggtgatgaaggtcggaatggacagtattatggcgagctactttgcc
ctttttgaagtcatcaaccactcctttgtgcggaagctggttcctaatgagtttccccac
aagctttatgtgcagaactacacgtcagcagtgccggggacttgcttggcgctccgcaaa
tggttgttcagcttccaggaggaggagctgctacgagacaacccgttggcgctgcactac
tgctttcaccaggcattggaagatgtgaagaagggattcataaaaacagaggacaaatcc
taccagctgcagaaactggcagagcagcgcaagatggccacgtacctgagtctgttgcgg
acatgcaagggctacaacgaggtgtccttcccccactgctcctgtgactccagaaggaaa
ggacatgtcatcacagcgatcagcatccatcacttcaagctgcacgcttgtaccgaggac
ggcacgctggagaaccaggtgatagcgtttgagtgggccgagatgcagcgctgggacacg
gacgaggaggggatggctttctgctttgaatacgcccgaggagagaagaaacctcgctgg
gtcaagatcttcactccatattttaactacatgcacgagtgcttcgagcgggtcttttgt
gagctgaagtggaggaaacaggtggaggaagaggcatccgacaaagacaacaagaactgc
agtaacaatgagtatctgcctcctctggagacgcagcagaagggatggcgccacctgggg
ggagagatcgcaacttcctaa
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