Gasterosteus aculeatus (three-spined stickleback): 120826311
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Entry
120826311 CDS
T07457
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
gat04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120826311 (thrb)
04081 Hormone signaling
120826311 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120826311 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120826311 (thrb)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120826311 (thrb)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
120826311 (thrb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
120826311
NCBI-ProteinID:
XP_040044402
UniProt:
A0AAQ4P502
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All DBs
Position
X:complement(14256185..14303464)
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AA seq
415 aa
AA seq
DB search
MSEPAENCSPGWKDEAIQNGYIPSYLDKDELCVVCADKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQRTVLDRQEPTQEEWDLVRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKENKPEDIGQASMVNTPEGNKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFDLDDSEVALLQAVILLSSDRPGLSSVARIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctcccccggctggaaagacgaggccattcaaaatggg
tacattccaagttacctagacaaggatgagctgtgtgtggtgtgcgcggacaaggccacg
ggttatcactaccgctgcatcacctgcgaaggctgcaagggtttcttcaggcgcaccatc
cagaagaacctcaacccgacctacgcctgcaagtacgagggcaagtgtgtcatcgacaaa
gtgaccagaaaccagtgccaggaatgccgcttcaagaagtgcatcgcagtgggaatggcc
accgacctggtgctggacgacagcaagcggctggccaagcgcaagctgatcgaggagaac
cgcgagcgccgtcggaaggaggagctgcagaggacggtgctggaccgccaggagcccacg
caggaggagtgggacctcgtccgcatggtgacggaggcccacatggccaccaacgcgcag
ggaaaccactggaagcagaagcggaagtttctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaaataag
cccgaggacattggtcaagcgtccatggtcaatacacccgaaggaaacaaagtggacata
gaagccttcagtcagtttacaaaaataatcacccctgccataacccgagtggtggacttt
gccaaaaaactgccaatgttttgtgagctgccttgtgaggaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtccctgcgagccgccgtccgctacgatccggagagcgag
accctcacactcaacggcgagatggcggtgacgcgcggccagctcaagaacggcggcttg
ggcgtggtgtcggacgccatcttcgacctcggcgtgtcgctgtcgtccttcgacctggac
gactcggaggtggctctgctgcaggccgtcatcctgctttcttctgatcggccgggcctg
agcagcgtggcgcgaatagagcggtgccaggaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcgcatttctggcccaagctgctaatgaaggtgacg
gacctgcggatgatcggcgcctgccacgccagccggttcctgcacatgaaagtggagtgt
ccgaccgagctattccctcctctcttcctggaggtcttcgaggactga
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