Gasterosteus aculeatus (three-spined stickleback): 120826328
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Entry
120826328 CDS
T07457
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120826328 (vps50)
Membrane trafficking [BR:
gat04131
]
Protein recycling
Others
EARP complex
120826328 (vps50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120826328
NCBI-ProteinID:
XP_040044440
UniProt:
A0AAQ4QNG9
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All DBs
Position
10:complement(10994620..11063150)
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AA seq
993 aa
AA seq
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MQKIKSLMSRQGLKSPQESMADLSPVESLRIPSKEELRELREQPIDPQAEQEIIESIEEV
YFSTDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQANLQLAAVICTNARRQLSMSKEGFTEASLGLLSNQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMVSYHRTMQWHEEHDKHEATPTADG
AAAAESDDSVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSSAGPVQEELSLFQQYHQEGNPFEMPAENKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDVPLKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTHGGRDAGPVRVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVAE
NAPVHGAAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWVVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEDFNKRLQDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcccttatgtcccggcagggcctgaaaagcccccaggaaagcatg
gcagacctcagccccgtggagagcctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccatcgacccccaggcggagcaggagatcatcgaaagcatcgaggaggtc
tacttctccaccgactccttcgacatggtgcagcacgagctggagaaactaccacctgag
ctaaatctgcaggagctggaggagtacagggacaagctgaagagacaacaggcggcagtt
tctaaaaaggttgctgatcttattctggagaaacagcccgcttatgtcaaggaactggag
cgagtgaccgcgttacaagccaacctgcagctggcagcggtcatctgcactaacgcacgg
aggcagctgagcatgtcgaaggagggattcacagaagccagcttgggtctcctgtccaat
cagaggaggcgacagctgctgacgggcttgcttaagtcactgaggaccatcaagacactg
caaagaacagatgtgagactcagcgagatgcttgaggaggaagactatcccggcgccatc
cagctctgcctggaatgtcagaaggctgccagcaccttcaaacactacagctgcatcagt
gaattgaattccaaactacaagacactctggagcaaatagaggagcagctcgacgtcgcc
ctgtcgaagacttgcaagcactttgatgtttcgcactacaccaaggtccaactggcctac
acgctcctgggaaagactcagaccgccatggaccagctgcacatgcacttcacccaggcc
atccacaacaccgtgttccaagtggtgctggggtacgtggagctctgtgccggcaacgcc
gacaccaagtttcagaagatgcagtacaaggacctgtgcacgcatatcactctggacagc
tacattccctgcctgactgatctgtgcaaggcattgtgggaggtgatggttagctaccac
cgcaccatgcagtggcacgaggagcatgacaaacacgaggccacgcccactgcagatggt
gcagcggcagcagagtctgatgactcggtggtggaccgcagctacgtgaagaagaagctg
gagcacggactgactcggatctggcaggacgtccagttgaaagtgaaggcctacatcctg
gggacggacatgtccaacttcaagtacgacgatttcattgtggtgctcgacgtcatcagc
aggttgatgcaggtgggggaggaattttgcggcagcaagtccgaagtcctgcaggagtct
atcaaacgccagagtgtcaactacttcaagaactatcacagggctcgactggaggagctg
aggatgtttctggagaatgagacgtgggaactttgcccagtaaagtctaactttaacatc
gcccagctacatgagtttaagttcatgggccagtgtcgttcgccctccgtctccccgagc
agacaggccgtgtcctcggccggccccgttcaggaggagctttctctgttccagcagtac
caccaggagggaaacccctttgagatgcctgctgagaacaaagaggaggagaccgaggat
gtgctggcgtctaacgggtacgagtcagacgagctggagaagagtgtgtaccaggactac
gacagtgatagtgacgtccccgaggagctcaagcaggactacgtggacgagcagacgggg
gacgtccccctcaagagtgcgtcccgagagaccataagaagcaagaaaaagtctgactac
aaccttaataagaccaatgcaccgattctcaccaataccaccctcaacgtcatccggctc
gtcgggaagtacatgcagatgatgaacattctgaagccgatcgccttcgacgtcatccac
tgtgtgtcgcagctcttcgactactacttatacgccgtgtacactttcttcggacgcaac
gacatgcccgtcccgagtccgtctctgccgactcatggtggcagagacgcggggcccgtc
agggtggtgggcccggcctgcttgtatgagtcatcgggtctgggcctcatcagcagcaga
ctgagaaccacactgaaccggatccaggagagcctcattgacatggaggcggtggcggag
aacgcacccgtccacggtgcagcagaggaccgaaaggagaaggtgccgagcccccatctc
agccagctggtggtcctcaccaacagtgggactctttatgggctcgcgcagagagtggtg
gccacagagtctctggtgtttctggctgaacagtttgagtccctgcagtcccacctggac
accatgatgcctgcagcaaagaagcccttcctgcagcagttttattcccaaacggtgtcg
acggccagtgaacttcggaaaccaatatactgggttgtcgcggcaaaggccatcgactac
gaacaaatgttgctcctgatggctggcgtgaaatgggacattagggaaataatgtcgcag
cataatgtgtacgtggacgtcctgttaaaggagtttgaggacttcaacaagcggttgcag
gacgtttccaggcacgtgcgcatcccgctgcctgtgtccaacgtgctgtgggagcactgc
atccgcctggccaacaggactctagtagaaggttacgctaacgtgaagaaatgcagcaat
gagggccgcgccctgatgcagctggacttccagcagttcctcatgaaactggagaagctg
acggacctgcggcccattcccgacaaagagtttgtggagacctacatcaaggcctactac
ctcaccgagaacgacatggagcagttcatcaagaaccaccgggagtactccatgaagcag
ctcgccaacctggtgaacgtttgtctgggctcgcacataaacaagaaggcccgccagaaa
ctcctggcggccatcgacgacatcgaccgacccaagaggtag
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