Gasterosteus aculeatus (three-spined stickleback): 120826416
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Entry
120826416 CDS
T07457
Symbol
cspg5b
Name
(RefSeq) chondroitin sulfate proteoglycan 5b isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120826416 (cspg5b)
Proteoglycans [BR:
gat00535
]
Cell surface proteoglycans
Others
120826416 (cspg5b)
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120826416
NCBI-ProteinID:
XP_040044614
UniProt:
G3NRK7
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Position
X:complement(10804854..10815933)
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AA seq
737 aa
AA seq
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MARGDSRSGTWQVLLTVSLVLIPLSAHGRHSLIRHHHHHHNQSSLSKEALNTRMVLSDDS
AERDHLIGAGLGAKLPLGSTRHHHKHAHLDVEEEDSPVGDELTAGGAGPDQPGNPMSDDV
ITVEFHSPAPDIAPSDVALNWAKAPKAQKQKDGKPTEWTLSDFYDYPSPDDELSALDATP
ELEDTPSFPLEMEDENPLLAGAPAAPAAPAAPDASAAPAAPAAPAAPAAPAAPAAPAAPA
APAAPAAPVAPANRRPNMDSGSFLPATLMPGMEIADGFGFAGAMGADGCRLGFVRSGPGV
CVSECDSQPNFCFNGGVCTVVAGMGAFCRCNVQDYIWNKGTRCDWAVTEFQVMCAVVGVA
SLVVIFLFMIIVFFAKSLHRLKSENIRLRKRSKYRLQSSEPQTDGLSVSTTADGSQPNVR
KLCDTPPIAPQAHTHNLAYYDNIICQRPSTTSYTWECKPRNSYNHFKDDPQKQEYPAKPP
QAKEEGSMNILNSHSPKHENNRPTSVAHDHGHHTPNNTEENAEDGVTIGLEVLLPKEAKL
HSETSSPLQYDVFLYKVANNGDSAPPSQAPNAHSANSYCSHPIPKSPKTPKTPRSAMVPK
SPKSPKCTKDRPPNNNEPSPGRRCSPRRHPSPGRHPSPGHHSTPGGYPSPTCRLSSHHSP
SKYQCMPTSSSSTTPPELRRPRGRLQCPGPECSGTGRQSRSGHIRPSPSTPHLTQPPPSP
SRVKYSPVSTRSLPPLS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtgacagtcgctcgggcacctggcaggtgctgctgaccgtctcgctggtc
ctcatcccgctgtctgcgcacgggaggcattcactgataaggcatcatcatcaccaccac
aaccaatcatctttgagcaaggaggccctgaacaccaggatggtgctcagtgacgactcg
gctgagagggaccacctgattggcgcggggctcggggccaaactcccactcggctccacc
agacatcaccataaacatgcccacctagacgttgaagaggaggactcacctgtgggggac
gagctcacagccggaggggcgggtccagaccagcccggaaaccccatgtctgatgacgtc
atcaccgtcgagtttcacagccctgcgcctgatattgcgccctctgatgtcgccctgaat
tgggccaaagctcccaaagcccaaaaacaaaaagatggaaaaccaacagaatggactctt
tcagacttttacgactacccgtcccctgacgacgaactctcggcgctggacgcgactcca
gaacttgaggacacgccttcattcccacttgaaatggaggacgaaaatccactcctggct
ggtgctcctgccgcccctgctgccccagctgcccctgatgcctctgctgcccctgccgct
cctgccgcccctgccgcccctgctgcccctgccgctcctgccgcccctgctgcccctgct
gcccctgctgctccagccgctcctgtcgctcctgccaacaggaggcctaacatggacagc
gggtccttcctaccagctactctcatgcccgggatggagatagcggacgggttcggcttt
gctggcgccatgggggccgacggctgcagactaggctttgtgcgctctggacctggggtt
tgtgtgtctgagtgtgacagccaacccaatttctgcttcaacggaggagtttgcactgtg
gtggcgggaatgggagccttctgcaggtgcaatgtccaggactacatctggaacaagggc
acacgctgtgattgggcggtcactgagttccaggtgatgtgtgcggtggtgggcgtggcc
tccctggtggtcatcttcctcttcatgatcatcgtattctttgccaagagtctgcaccgc
ctcaagagtgagaatatacgccttcgcaaacgcagtaagtaccgcctacagagcagcgag
cctcagacagacggcctctccgtttccacaacagccgacggctcgcagccaaacgtaaga
aaactgtgcgacacccctccgatcgctccgcaagctcacactcacaacctggcgtactat
gacaacattatctgtcagaggccatcaacaaccagctatacctgggaatgtaaacccaga
aactcttataatcacttcaaggatgatcctcagaagcaggaatacccagccaagccccca
caagccaaggaagaggggtcaatgaatatcctcaactcgcattcccccaaacacgagaac
aaccgcccgacctccgtcgcccacgaccacggccaccacacccctaacaacactgaggag
aacgccgaggatggagtcaccatcggcctggaagtgctcctccccaaagaggccaagctc
cactccgagaccagctcgcctctacagtacgacgtcttcctgtacaaggttgccaacaac
ggagactccgcccctcccagccaagcgcccaacgctcacagtgccaactcctactgctct
cacccaatacctaaatcgcccaaaacacccaagacgcccaggtccgccatggtgcctaag
tcgcccaaatcccccaagtgcaccaaggaccgaccacctaataacaacgaaccctcgccc
gggaggcgatgctcacctcgccgtcacccgtcacccggacgccacccgtcacccgggcat
cactctactcctggtggatatccttcccccacctgccgcttgtcctcccatcactccccc
tctaaataccaatgcatgcccacctcctcctcctccaccaccccacctgagttacgcaga
cccagaggtcggttgcaatgccccggcccagagtgctctgggaccgggagacagtcccgg
agtggacacattcgtccatcaccctctacccctcacctgacccaacctccgccatctcca
tccagggtgaagtacagcccggtcagcacccgttctctgccaccactctcttga
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