Gasterosteus aculeatus (three-spined stickleback): 120826438
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Entry
120826438 CDS
T07457
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecule (CAM) interaction
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120826438 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120826438 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120826438 (sdc3)
Proteoglycans [BR:
gat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
120826438 (sdc3)
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Paralog
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Motif
Pfam:
Syndecan
Transformer
DUF1275
SDH8
Motif
Other DBs
NCBI-GeneID:
120826438
NCBI-ProteinID:
XP_040044659
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Position
10:10227527..10255901
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AA seq
439 aa
AA seq
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MKLPWLWALAALLAHTATGQTPPIDDEGSTRDEFFDDEDLYSGSGSGFPGIGSKPTSAGV
SFTTEEPLLLSTTQATGPAPSASPAAEPSPSPDDPAATLLPPEADGESGVFWEREMEKEK
EREREMERQRELEKERQREQEREREKQLERERERERVREMEREKERERERERERERERER
ERQRERELERERELERIRAAAQTTPAPRPPAVTTVPPTSPAEAALPTAGWDDLSTTEEEE
DVYLPPEPSPFSPGSDMETTTEEDMSATTETTPEPTTTAPSTTAATVKTRWPFRPRVPTT
TATPAVKTERTTRPQQPTVTQEGNNEAGAAEPSGDFEVRDDRRNDLGRGGRPADPDLTGN
TVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEE
PKQATVTYQKPDKQEEFYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctatgggcgctcgcggcgctgctcgcccacacggccacgggacag
accccgcctatcgacgacgagggctcaacgagagacgagttcttcgacgatgaggacctc
tactcgggttccggctctggctttcccgggatcggttctaagccgacatcggcaggtgtg
tccttcactacggaagagcccctcctcctctccaccacgcaggccaccggccccgccccc
tccgcctcacctgcagccgagccgagccccagcccggacgaccccgccgccaccctgctg
ccccccgaggccgacggagagagtggtgtattctgggaaagggagatggagaaggagaag
gagcgagagagggagatggagcgacagagagagttagagaaggagagacagagagagcaa
gagagggagagggagaagcagttggagagggagagagagagggagcgcgtccgagagatg
gagagagagaaagagcgagagcgagagagggagcgtgagagagaaagagagagagagaga
gagcgacagagagaacgcgaactggaaagagagagagagctggagcgaatcagggccgcc
gcccagaccacccccgccccacggccccccgcggtgaccaccgtcccgccgaccagccct
gcagaggccgcgctgcccactgccggttgggacgacttgagcaccacagaagaagaagag
gacgtctacctgccacctgaaccctcacccttttcccccggctcagacatggaaaccacc
acagaggaagacatgtccgccacaacagagaccacccccgagcccacgacaaccgcgcca
tccaccaccgccgccactgtcaagaccaggtggcccttcaggcccagggttcccacgaca
acagccactccggcggtgaaaacagagcgaacaacgcgtccacagcagccgacggttaca
caggagggtaacaatgaggcgggagccgccgagccaagcggagacttcgaggtccgcgat
gatcggcgaaatgatctcggtcgaggtgggaggccagcggatcccgatctgaccggcaac
acggtggacggaggaagctccgccgcccagctgccgcagaagaacatcctggagaggaag
gaggtcctgatagcggtcatagtgggtggagtggtgggcgccttgttcgcggccttcctg
gtgatgttgctggtgtaccggatgaagaagaaggatgagggaagctacacactggaggaa
cccaaacaggccaccgtcacctaccagaaaccggacaagcaggaggagttttacgcgtaa
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