Gasterosteus aculeatus (three-spined stickleback): 120826595
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Entry
120826595 CDS
T07457
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120826595
Membrane trafficking [BR:
gat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120826595
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
ig
Ig_2
V-set
LRRNT
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
120826595
NCBI-ProteinID:
XP_040044963
UniProt:
A0AAQ4RLD5
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All DBs
Position
X:7375687..7380427
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AA seq
609 aa
AA seq
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MFEGIAVLRWLCWGAVYLLAVSVALSSETLPPCPQSCRCNAALQELNCSGSQLARVPDDL
PPNTKLLNLTRNRITALVQRKFQSLPQLLDLDLSDNIVAVMEVEAFLGLERLVTLRLARN
RLKLIPVGVFAGLPKLKLLDISSNEILVFIDFTFRHLTALQFIKATDNELVFISHQAFAG
LTSLHELHLDGCNLTAVPTEAFTQLSGLRSLHFHQLGFATLQNYSFRQLGRLKELVITRS
RWLETLAANSLFGLNLTSLTIKQCNLSAVPYVPLHPLVYLVYLDLSFNPITDIHGNLFGD
MLRLRELHLVGCSLLRIEIEAFKGLAHFKLLNVSGNLLTTLEAGAFHSVDNLRTLGLDNN
PLACDCRLLWVVPRRQHLDFGGNPPTCSTSVHLQGRYVLDFTEAELPGLLTCRPPRILNR
KPQEVKVDQGHTAVMYCIAEGDPVPSVTWLSPQLKTLSPIGRIRAVSNGSLEVHYAQPQD
SGAYLCVASNAAGNDSLPVSLHVRVFPSSSKNPFRLKGWFTFPSASPGVNGNQIITFDVR
TLLVVATIGLLSFFSSVSVCFIFMFFWSKSKGQIKHTATIAYVPRSTVASSNGGKGNCVE
KNRFTMKLI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggatcgccgtcctccgatggctgtgctggggagccgtctaccttttggca
gtgagcgtggctttgtcctctgaaacgctgccgccgtgtccacagtcctgccgctgcaac
gccgcgctgcaggagctgaactgctccgggagccaactggcccgagtgcccgacgatctc
ccaccaaacactaaactgctaaacctaacacgcaataggatcaccgctctggtgcaacgg
aagttccaaagtttgccacagcttttagatttggacctgagtgacaacatcgtggcagta
atggaagtggaagcgtttctcggcctggaaagactggtgactctgcgtcttgctcgtaac
cgcctgaagctcattcctgtcggagtgtttgctggtttgccgaaactgaagttactggac
ataagcagcaatgagatccttgtttttatagattttacttttcggcatctcactgccctt
cagttcattaaagcgacagataatgagttagtttttatttctcatcaagctttcgcaggc
ttgaccagtctgcacgagttgcacctcgatggctgcaacctcaccgccgtgccgacggag
gcgttcacacagctcagtggtttaagaagtcttcattttcaccaactgggcttcgccacg
ctgcaaaactactctttccgtcaactggggcgcctcaaggaactggtcatcactcgatcc
cgctggctggagaccctggcggcgaacagtctctttggtctgaatcttacgtctctaacc
atcaaacagtgtaacctcagcgcggtcccctacgtccctttacaccctcttgtatatctc
gtatacctcgacctctcttttaacccgatcaccgacattcacgggaacctgtttggagac
atgctcagactccgagagctccatctggtgggctgctccttgctgcgtatcgaaatcgag
gcatttaagggtttggctcatttcaaattgctgaatgtatctggaaatcttctcaccaca
ctggaggcgggagctttccattcagtggacaacctaagaactctgggacttgacaacaac
ccactagcgtgcgactgccgcctgctgtgggtggtgccgaggcgacagcatctggacttt
ggtggaaatccaccaacttgctctacctcagttcatttgcagggacggtatgttctcgac
tttaccgaagcggagctaccgggcctgctcacgtgtcggccgcctcgtattctcaaccgc
aaacctcaagaagtgaaggtagaccaaggacacacggcggtgatgtactgcattgcagaa
ggtgaccctgtgccatctgtcacctggttaagccctcagctaaaaactctttctcccatt
ggtagaatacgggctgtctccaatggttcgctggaggttcactatgctcaacctcaagac
agtggtgcttatctctgcgtggcatctaatgctgcgggaaacgacagcctgcccgtcagc
ctccacgtgcgagtctttccatcgtcctctaaaaatcccttccgtcttaaaggttggttc
acctttccgtccgcttctccgggtgtcaatggaaatcagatcatcacatttgatgtaagg
acattattagtcgttgcaaccataggacttctttcattcttcagctccgtcagcgtatgt
ttcatcttcatgttcttctggagtaagagtaaagggcaaataaagcacacagccacgata
gcatatgtcccgcgaagcaccgtggcaagcagtaacggaggaaagggcaactgtgtggag
aagaacaggttcaccatgaaactaatatga
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