Gasterosteus aculeatus (three-spined stickleback): 120826837
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Entry
120826837 CDS
T07457
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120826837 (irx1b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120826837 (irx1b)
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120826837
NCBI-ProteinID:
XP_040045333
UniProt:
G3P2R8
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Position
X:15778281..15782231
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AA seq
472 aa
AA seq
DB search
MSFPQLGYPQFLSASHEMYAGERPASAREGGTEGGLSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGAADLALISQMGSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDEHGKNGSDDDDEEEEIDLETVDIERPEEQRAGEQGSGKGEAE
GECGGEGEGEGEAGLADREQASEPKSSESSRTLSVEGSRGTEAAVPLDRSPVVKLAVDRS
PGRQDCQRPPQSKPKIWSLAETATAPDSSHRPPPAAHAHHPALASAGHPALLSGHGIYTC
QIGKLHNWANAAFLNANSILNMRSLLGGAPAGHLPLHGAVPVARHDARPAAAGPGTSGTE
DDSDVESSGSFSPKRDDEESDHRPDSLKSPFQRISDRPHHGTAPQRVVTTTL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcagcgcgtcccatgagatgtacgcg
ggcgagcggccggcctccgcccgggaaggaggcaccgagggcggcttgagctcgtccgcc
accgccgctgcggtcggctccatgctggggatgtacgggagcccgtgggcggcccacaac
tacagcgccttcctgccgtacagcggagccgcagacctcgccctcatatcgcagatgggc
tcccagtacgagctgaaggacagcccggggtcccacccggcctctctgccggtccacgcc
gcccaaggcttctacccatacggccagtacccgtacggggacccgtcgagggccaagacc
gccacccgggagaccaccagcaccctgaaggcctggctgcaggagcaccagaagaaccct
taccccacaaagggagagaagatcatgctcgccatcatcaccaggatgacactcacacag
gtctcgacgtggttcgcaaacgcgcgcaggcgcctgaagaaggagaacaaggtaacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgagcac
ggcaagaacggcagcgacgacgacgacgaagaggaggagatcgatctggaaaccgtcgac
atcgaaagacccgaggagcagcgggcgggggagcagggctccgggaagggggaggctgag
ggagagtgcgggggcgagggagagggagagggggaggccggcctggcggacagagagcag
gcctcggagcccaagagctccgagagcagcaggacgctttccgtggagggctcgcgagga
acggaggcggcggttcctctcgacagatcgcccgtcgtcaaactcgcggtggatcgttcc
ccgggcagacaggactgccagagaccgccgcagagcaaacccaaaatctggtccctggcc
gagaccgccacggccccggacagctctcacagacctccccccgcggcccatgcgcaccac
ccggctttggcctccgccggccacccggccctgctctcgggccatgggatttacacgtgc
cagatcggcaaactgcacaactgggccaacgcggcttttctgaacgccaattctattttg
aacatgcggtcgctcctcggaggagcgccggccggacacctgcctctccacggagcggtg
ccggtggcgcgtcatgacgcgcggccggccgcggcggggcccggaacttcggggacggag
gatgacagcgatgtggagtcgtcgggaagcttcagcccaaaaagagatgacgaggagagc
gaccacaggcctgactccctgaagtccccgttccagcggatatctgacagacctcaccac
gggacggcaccacagcgagttgtgacaacgacattatga
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