Gasterosteus aculeatus (three-spined stickleback): 120826842
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Entry
120826842 CDS
T07457
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120826842
Peptidases and inhibitors [BR:
gat01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120826842
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GFIT
Motif
Pfam:
Collagen
VWA
Kunitz_BPTI
VWA_2
ARB_00930_C
CBM-like
Motif
Other DBs
NCBI-GeneID:
120826842
NCBI-ProteinID:
XP_040045338
UniProt:
G3N491
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Position
10:complement(1540800..1567375)
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AA seq
987 aa
AA seq
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MTMRWLEKVLILTLALSSPTTCQKRKGKGQRDDYQVIINEAKTLICPVEIMFIVDSSERA
KSLLFERQKDFVLRFSTKLLQLQSAGWRLRLRLAALQYSSTVSVEHNFRDWQDLDVFQSR
VASMTFIGHGTYTAYAITNSTQVFGRETSSSSLRVALLMTDGVDHPRSPSAVTAASEAKR
LNIRVFAIGLSGPQRDDSMGTKLRSIASAPPQQHILSLADSQLDDRLFNELNSIVKMGCP
PPKNCLCERGERGHPGSTGKPGEPGSDRAPGPMGSRGEPGINGRPGMEGLEGRTGIEGEK
GEQGECGATGKQGEQGRDGPPGPRGPRGEQGARGGPGDQGPEGPSGSKGERGLRGASGPR
GDNGIGFPGPKGDKGNQGRPGPPGPMGIGEPGAPGPAGPPGMQGSPGFPGEGLPGSKGDR
GYEGPKGSRGPPGVGHKGDKGNTGAPGLPGMVGFPGEGVQGEKGDLGPAGPSGPRGPPGL
GIVGSKGDQGFPGEPGPQGERGVGEKGPKGEPGSDGTAGIPGIPGEDGAAGPKGEMGLPG
LRGLEGAQGKGIHGEKGERGDRGPRGLPGSPGPVGPAGAKGEPGSPGMVGLPGTAGRGLP
GAKGDPGPIGPAGPVGEPGVGITGPKGSKGNTGPLGPPGMKGDGFPGPQGLPGLPGLQGE
MGPEGKGLPGPKGDRGLSGVPGPSGPPGIGLYGPKGSTGPPGPPGLLGPHGEGIQGPKGE
PGFQGPVGPRGPPGDVLPGEKGNRGRPGDRGKKGDSGNDGEPGSTGPMGRPGEKGERGLT
REEVVRIIREICALEGKILNHICEPDDRMTSVQNSDSPPVEIHPAESHSEEFPIEESIQL
ELPVEAATTLSPQFHVSGAADESLFDATLLVEPREQLTDILFASPGGRGPQGPRLTSMVG
PQTSTGRLHQIEIKLAPVSSPPTTTDSSLTGEGCSQTLDPGSCRQYVVKWYYDPEANACA
QFWYGGCQGNGNNFETEASCRSSCVYT
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgactatgcggtggctcgaaaaggttctgatcctcacattggccctatcaagtccaact
acatgccaaaaaagaaaagggaaaggacaaagagatgattaccaggtcatcatcaatgag
gccaaaactctgatctgcccggtggagatcatgttcatcgtggacagctcagagagggcc
aaatctctgctatttgagcgtcagaaagactttgtcctgcgcttcagcactaagctcctg
cagctgcagtctgccggctggcggctgcggctgcgcctggccgctttgcagtacagcagc
accgtgtcggtggagcacaacttcagggactggcaggacctggacgtctttcagagccgt
gtggcctccatgaccttcatcggccacggcacttacaccgcctacgccatcaccaactcg
acccaagtatttggccgcgagacgtcctctagcagcctgagggtggccctgttgatgacg
gatggagtggaccatccacgcagccccagtgctgtgacagctgcctccgaggccaagcgg
ctcaacatcagggtgttcgccatcgggctgtcgggcccgcagagggacgactccatgggt
acgaagctaagatccatagccagcgcccccccgcagcagcacatcctcagcctcgctgac
agccagctggatgacaggctcttcaatgaactgaactcaattgtcaaaatggggtgccct
ccgccaaagaactgtctgtgtgagcggggggagcggggtcaccctggaagcacgggtaaa
ccaggcgagccggggtctgatcgagctccgggtccaatgggatctcgtggggaacctggc
attaacggacgtccaggaatggagggccttgagggtcgaacgggcatcgaaggggaaaag
ggagaacagggggaatgtggtgccactggtaaacaaggagaacagggtagagatggaccc
cctggccccagaggccctagaggagagcagggagcgaggggaggacctggtgatcaaggt
cctgaagggccatctggatctaaaggtgaacgaggactgagaggtgcatctggacctcga
ggagataacggcattgggttccctggtcccaagggtgacaaggggaaccaaggaagacca
ggtcctcctggaccaatgggtattggggaaccaggagcaccaggtccagcagggccacca
gggatgcaaggatcaccagggtttccaggtgagggtcttccaggatccaagggtgaccgg
gggtatgagggtccaaagggtagccgtggacctccaggagttgggcacaaaggtgataag
ggaaacacaggagcccctgggctgcctggcatggtggggttccctggggaaggagtgcaa
ggagaaaagggggacctaggtccagctgggccttctggtcccagaggacctcctggattg
ggtatagttggatcaaagggcgaccagggttttccaggagagccgggacctcagggagag
agaggtgtaggtgaaaaagggccaaagggggagccagggtctgatggtactgctgggata
ccaggcattcctggtgaggacggagctgctgggccgaagggagagatggggttgccaggt
ctgcgaggcctagagggagcacaggggaaaggcatccatggagaaaagggagaaagaggg
gaccgagggccaaggggacttccagggtctccgggccccgttggaccggctggagctaag
ggagagccggggagtccgggaatggtgggcctacctggaacggctgggcgtggcttacca
ggagcaaagggagatcctggtcccataggaccagctggacctgttggagaacccggtgta
ggaatcactgggccgaagggtagcaaaggaaatactggccctttgggcccaccaggaatg
aagggggatggcttcccaggaccacaggggcttcctggcttaccaggactgcaaggagaa
atgggaccggaagggaaaggtctgcctggacccaagggggacagaggcttgtcgggtgtg
ccggggccatctggtcctccagggattggactttatggaccaaagggctctacagggccg
cctggtccaccaggcctgttggggcctcatggagaaggcatccagggtccaaagggagaa
cctgggtttcaggggccagtgggccctcgggggccaccaggggacgttcttccaggagag
aagggtaacagaggcagacctggagatcggggaaagaaaggagacagtggaaatgatggg
gaaccgggatctactggacctatggggagacctggagaaaagggagaacgaggactcaca
agagaagaagtggtcaggattataagagaaatatgtgctctggaaggcaaaatactgaat
cacatttgtgagccggatgacagaatgacatctgtacagaactccgattctccacctgtg
gaaatacacccagcagaaagccactccgaggagttcccaattgaggaaagtatccaactt
gaactcccagtggaggcagcaaccaccctgagtccacagttccatgtgtcaggtgcggcc
gacgagagcctgtttgatgctaccctgttggtggagcccagggagcagctgaccgacatc
ctgtttgcctccccagggggcagggggccgcagggccccaggctgacctccatggtggga
cctcagacgtcgactggccggctgcaccagattgagattaaactggctccggtcagctct
cctccaaccacgacagactcatcgctgacaggtgaggggtgcagtcagactctggacccg
ggttcctgtcggcagtacgtggtcaagtggtactacgaccccgaggccaacgcctgcgct
cagttctggtacggcggttgtcagggcaacggcaacaactttgaaaccgaagccagctgc
aggagttcctgcgtctacacgtaa
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