Gasterosteus aculeatus (three-spined stickleback): 120826854
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Entry
120826854 CDS
T07457
Symbol
si:ch73-196l6.5
Name
(RefSeq) riboflavin transporter 2
KO
K14620
riboflavin transporter 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120826854 (si:ch73-196l6.5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120826854 (si:ch73-196l6.5)
Transporters [BR:
gat02000
]
Solute carrier family (SLC)
SLC52: Riboflavin transporter
120826854 (si:ch73-196l6.5)
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Gene cluster
GFIT
Motif
Pfam:
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
120826854
NCBI-ProteinID:
XP_040045359
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Position
X:complement(4373351..4378843)
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AA seq
448 aa
AA seq
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MSLLTHLLACLFGMGSWVSINGLWVELPLVVPQIPEAWFLPSYLSVLIQMANVGPLFVTL
MHRFRPGALNEAAVIYAIVGLGTAASFLLAFFWRETAVVAGAPRSVALLVLTFFLATVDC
TSSVTFLPFMMRLKPQYLTTYYIGEGLSGLLPALVALVQGAGVVHCVNSTGSLNHTRNSS
ESSATFDLRAEYQPANFSVEVFFFFLSAMMLVCLVAFLLLNYHPSVARQRPSGRSANGVK
QKCARERKRAEQKPMMDPYRPASRRPRSSFGTGSYSWTQVFYIFVVLAWTNALTNVVLPS
VQSYSCLPYGNSAYHLSATMAAVANPLACFIAMFFPIRSLVLMGALTLLGSAAGAYIMSM
AALSPCPLLVHQTSGAAVIVLAWVLFVLALSYVKVIIGLILRDEGHGALVWCGAVVQLGS
LLGAVTMFPVVSVYSFFSSGDPCNTRCQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcctcacccacctgttggcctgtctcttcgggatgggctcctgggtctccatc
aacggcctgtgggtggagctgcccctcgtcgtcccccagatccccgaggcctggttcctg
ccctcgtacctctccgtcctcatccagatggccaacgtcgggcccctcttcgtcaccctg
atgcaccgcttccggcccggcgccctgaacgaagcggccgtcatatacgcgatcgtcggc
ctgggcaccgccgccagcttcctgctggcgttcttctggagggagaccgcggtggtggcg
ggcgcgccgcgcagcgtggccctgctggtcctgactttcttcctggccaccgtcgactgc
acgtcctccgtcaccttcctccccttcatgatgcgcctcaagcctcagtacctgaccacg
tactacatcggcgagggcttgagcggcctgctgcccgccctggtggctctggtccaggga
gccggagtggtccactgcgtcaacagcaccggctctttgaaccacacccgtaactcctcc
gagagctccgcgacctttgacctgcgggccgagtatcagccggccaacttctccgtcgaa
gtgtttttcttcttcctgagcgccatgatgctggtgtgcctggtggcctttctgttgctg
aactaccacccgtccgtggcccggcagcggcccagcggtcgctccgccaacggggtgaag
cagaagtgcgcgagggagaggaaacgggcggagcagaagcccatgatggatccgtacaga
cctgcgagccggaggcccaggagcagcttcggaaccggctcgtacagctggacacaggtg
ttctacatctttgtggtcctggcctggaccaacgctctgaccaacgtggtgcttccctcg
gtgcagtcctactcgtgcctgccgtacgggaacagcgcctatcacttatcagccaccatg
gctgctgtggcgaaccctctcgcctgcttcatcgccatgttcttccccataaggtccctg
gtgctgatgggggccctcacgctgctgggcagcgcggcgggcgcctacataatgagcatg
gccgcgctgagtccctgtccgctgctcgtgcatcagacctccggcgccgccgtcatcgtg
ctggcatgggtgctgtttgttctcgctctgtcctacgtgaaggtgatcatcgggctgatc
ctgcgcgacgagggccacggcgccctcgtgtggtgcggcgcggtggtgcagctgggctcc
ctgctgggagccgtgaccatgttccccgtggtcagcgtgtacagcttcttctcctccggg
gacccgtgcaacaccagatgtcaatga
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