Gasterosteus aculeatus (three-spined stickleback): 120826919
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Entry
120826919 CDS
T07457
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
120826919
NCBI-ProteinID:
XP_040045445
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Position
X:10205337..10226333
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AA seq
1179 aa
AA seq
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MSSVCVLKSKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQTPQAVPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQQVRSMDELNHDFQALALEGRAMGEQ
MLPGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGV
GSVMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGQRDGEVEEEKREKPKATFEG
EKLKELTEVEADVINDVINPNGLPVQNGLDVDVKEFGRPPGNMPAPGPEGDLLGGPGGVG
ADGMTPMGGGPKPPEDFSGVEQGGVAMDPMESVMEPLQFDYNSQMPMDNAPTVGLFDYAN
QQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAQAFVPNPYIISAAPPGTDPYAAG
LAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANSSANQQAANQNQQNQQQVMRAG
GNQRPLTPSQGQQNQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVV
NTGGRSGPVRLMGPASVIISPSAAQAVAAAAASAGGANGGLGGGANGPFRAMTSQQPQQQ
GGPGGALGGSSFYGSSSLNSSSQSSSLFSQGSGQPGPGSASLGFSQQASSSLGATLGATL
GGFGTAGRTTPFPRSLLLESYQSVANSSGGSGSRRDSLTGNSELYKRTPSSLTPIGHGGF
YNGTLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPG
AEAKYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDI
AGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFG
SLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD
QNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE
ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT
HASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPSQRKIVMHKIRPH
VTTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagagtaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatcccccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaacagggcagacccctcaggccgtgccccccagccagcagggtgtggcgggtgctgga
cgctcccaggacgatgccatggtggactatttcttccagcggcagcacggtgaacaacct
ggcaaacatcgctggcccactggagacaacatccatgacagccagcaggtgcgatccatg
gacgagctgaaccatgactttcaggctctggctctggagggacgcgccatgggagagcag
atgctacctggtaagaagttctgggagacggacgactctgggaaggacggacctaaaggg
atctttctagaccagtggagggacagtgcatggggggcctctgatcactccgtgtctcag
ccaatcatggtgtcccgtcggccggggcaaggtttccatggcggtggggaagtcggggtg
ggctcggtgatgtcaccgcgctctgagagtggagggctgggagtgagcatggtggagtat
gtcctctcctcctcgccggctgaaaaactagattcctgcctcagaaaaggaccttatgga
cagcgggatggagaggtggaggaggagaagcgggagaagcctaaggcaacatttgaaggg
gagaaactgaaagagttgaccgaggttgaagctgatgtaatcaacgacgtcatcaacccc
aacgggctgcctgtgcagaacggcctcgacgtcgatgtcaaagagtttggtcgcccccca
ggcaatatgccggcccctggtcctgagggggacctgcttggaggtcccgggggcgtaggg
gctgatggcatgacacccatgggtggaggccccaaacctcccgaagacttctctggcgtg
gaacaaggtggcgtcgccatggacccgatggagtcagtgatggagccgctgcagtttgac
tacaactcccagatgcccatggacaacgcccccaccgtgggtctatttgattacgccaac
cagcagcagctgttccagagaaacaacgcactagcagtgcagcagttaacggctgcccag
cagcagcagtacgccttggcagcagcacagcagtctcacattggtctggcgcaagcattt
gtacccaatccttacatcatcagtgctgctccaccagggacggacccctacgcagccggc
ttggcggcagcagctacactcggtccggcagtgatgcctccccagtactacggcgtgacc
ccctggggggtctaccctgccaaccttttccagcagcaggctgctgcagccaacagctct
gccaatcagcaggcggcaaaccagaaccagcagaaccaacagcaggtaatgcgtgctggt
ggcaaccaacgacctttgacccccagccaaggtcaacagaatcagcagaatgaccagctg
gttgcagcagcagcagtcaactcagcccttgcctttgggcaaggcttagcagcaggagtc
cccggctaccctgtcctggcccctgcagcctactatgaccagacaggggccctcgtggtc
aacactggaggtcgaagtggccccgtccgcctcatgggccccgcctccgtcatcatatct
ccttctgcagcacaagcagtcgcagcagcagcagcctccgcgggtggtgccaacggtggt
ctaggcggtggggccaacggtccgtttcgtgccatgacgtcccagcagcctcagcagcag
ggtggccccggtggcgctctgggagggagctccttctacggatcctcctccctgaactca
tcctcccagagctcctcactcttctcacaaggctcaggccagccgggaccaggttctgcc
tccttgggcttcagccagcaggcctcctcctccctcggtgccacactgggggccacgctc
ggaggcttcggcactgcaggtaggactacacctttcccacggagtctactgctggagtct
tatcaaagcgtggccaactcaagtggtggcagcggttccaggcgggactcactgacgggc
aacagtgagctgtacaaacgcacgccctccagcctcaccccgatcggccatggaggcttc
tacaacggcaccttgggcttcagtccatcccctggccccgtgggaatgcccctgcccaac
cagggcccctcccattccctcacaccaccgccttccttatccaatcacagctcctcctcc
aacctcaatcttggaggcctgaccaatggcagtggccgtttcatctctgcagctccagga
gcagaagccaagtaccgcagcgccgccagctcaggctcctccctcttttcacccagcagt
cagttgttcccgtcgtcacggctacgctacggcatgtcggacgtgatgccgtccggccgc
agccgcctactggaggacttcaggaacaaccgctaccccaacctgcagctcagagacatt
gccggtcacatcatggagttcagccaggaccagcacggcagcaggtttatccagttgaaa
ttggagcgagccagttcagcagagcgccagctcgtcttcagtgagatcctgcaggcggcc
taccagctgatggtggacgtctttggaaattacgtcatccagaagttttttgagtttggc
agcctggaccagaagctggctctggcagagaggatccgaggtcatgtgctgtctctggct
ctgcagatgtacggctgcagggtcattcagaaagctctggagttcatcccctctgatcag
caggtcatcagtgagatggtgcgggagctggacggccacgtgttgaagtgcgtgaaggac
cagaacggtaaccacgtggtccagaagtgcatcgagtgcgtccagcctcacgcgctgcac
ttcatcatagacgccttcaagggacaggtcttcgccctctccactcacccttatggctgc
cgagtcattcagcgcattctcgaacactgccttcctgaacagacgctgcctatactggag
gagctgcatcaacacacagagcagctggtgcaggaccagtacggcaactatgtgatccag
cacgttttggagcacggccgagctgaagataagagcaagatagtggcggaaattcgaggc
aatgtactgggactgagccagcacaagtttgccagtaatgtggtggagaaatgtgtgacc
cacgcctctcgggccgaacgggccgtgctgatcgatgaggtgtgcagcctgacggagggc
ccccacagtgccttatacaccatgatgaaggaccagtacgccaactacgtggtgcagaag
atgatcgacgtggccgagccgtcccagcgcaagatcgtaatgcacaagatccggcctcac
gttaccaccctgaggaagtacacgtatggaaaacacatcctggccaagctggagaaatac
tacatgaagaacggcgttgacctgggtcctctctgcggccctcccaacggcatcatgtaa
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