Gasterosteus aculeatus (three-spined stickleback): 120826942
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Entry
120826942 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6-B-like
KO
K20012
growth differentiation factor 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04060
Cytokine-cytokine receptor interaction
gat04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120826942
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120826942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120826942
Cytokines and neuropeptides [BR:
gat04052
]
Cytokines
Transforming growth factors (RSTK binding)
120826942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
120826942
NCBI-ProteinID:
XP_040045489
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All DBs
Position
10:complement(3756215..3760095)
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AA seq
478 aa
AA seq
DB search
MWACSRPPPPFIIIFFYFCTACPPDLCALSRSSHLLRTGCRVQLRLGPRSPPPLPGHSSD
SGRDRRMDLYHVASLCGALLFVWGIPGSYTLAISPRAAPKSSKVSRIVDGQEASKYFKEF
YARPSLDRHNKATSKDSIEPHDYMMSIYKTFSTAERLGLNASFFRSSKAANTIASFVDSG
QDDLPLLPLRRQQYLFDVSTLSKKAEVLGAELRIYTKVSGNFRISETEPVDVQLLSCHDR
QLLESKTLDLQDSQRPKWEVLDVWEIFKEQQHMSQGKHFCLELRAMLDNPERELDLQHLG
LHRLGRPQQKKAILVVFTRSKKRQTLFSERREGRALLGPARKAKERGPGAKASRRRRTPA
SKTRHGKRHGKKSKTRCSKKPLHVNFRDLGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEP
TNHAIIQTLMNSMNPSNMPPSCCAPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtgttctcgccccccacccccctttattattatttttttctacttttgcacc
gcctgtccgccggatttgtgcgcactttcgcggagtagccacttgctgcggactggatgc
agagttcagctccggctcggcccgcggtcccctccacctctccccggccacagctctgac
tcgggacgagaccggaggatggatctctatcacgtcgcttccctctgcggggctctgctg
tttgtttgggggatccccggctcttacactctcgccatttcccctcgagcggccccaaag
agcagcaaggtgtcgcggatcgttgatggacaagaagcctctaaatacttcaaggagttt
tacgcgaggccgtcactcgacagacacaataaagcgacttctaaagactccattgagccg
cacgactacatgatgtctatttataagaccttctccacggcggagagactgggactgaac
gccagcttcttccgctcctccaaagcggcgaacaccattgcgagttttgtggacagtgga
caagatgacctcccactcctccctctgaggagacagcagtatctgttcgacgtctccacg
ctgtccaagaaggcggaggtgctgggagcggagctcaggatatacaccaaagtgtctggg
aatttcaggatatcggaaacagagcccgtcgacgtccagctcctctcctgccacgaccgt
caactgctcgaatccaaaacgctggacttgcaggactcccagaggccgaagtgggaagtg
ttggacgtgtgggaaatattcaaagagcagcagcacatgagccaggggaagcacttctgc
ctggagctcagggccatgctggacaacccggagagggagctggacctgcagcatctgggc
ttgcacaggctcggcaggccacagcagaagaaggccatcttggtggtgttcaccaggtcc
aagaagaggcagaccctcttcagcgagaggagggaggggagagcattgctgggtccagcg
aggaaggccaaagagaggggccctggtgccaaggccagcaggaggaggaggacaccggcg
tccaagacccgccacgggaagagacacggcaagaagtccaagacccggtgcagcaagaag
ccgctgcacgttaacttcagagacctgggctgggacgactggatcatcgccccgctcgat
tatgaagcttaccactgcgagggggtgtgcgacttccccctgcgctcccacttggagccc
accaaccacgccattatccagactctgatgaattcaatgaaccccagcaacatgccgccc
agctgctgcgccccgtccaagctcagccccatcagcatcctttacatcgactcaggaaac
aacgtggtctacaaacagtacgaggacatggtggtagagtcctgcggctgcaggtag
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