Gasterosteus aculeatus (three-spined stickleback): 120827408
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Entry
120827408 CDS
T07457
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120827408 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
gat03016
]
120827408 (gtpbp1)
03012 Translation factors [BR:
gat03012
]
120827408 (gtpbp1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120827408 (gtpbp1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120827408 (gtpbp1)
Translation factors [BR:
gat03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
120827408 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
120827408
NCBI-ProteinID:
XP_040046195
UniProt:
A0AAQ4RSU4
LinkDB
All DBs
Position
XI:12845616..12858052
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AA seq
679 aa
AA seq
DB search
MASIAASPEPGVSPVSMALADALVPASIFAPDRGGCGDETGDECYDDGDLINGELEHRGV
DFTNKLALVSPNGEQYDSLLRQLRDRMEEGCGETIYMVGMGSDGGDWGLNDTDMEASAAT
VRSMCEQVDADLITLRERTEAAGLVRDYLIRRRVGELDFLEVRVAVVGNVDAGKSTLLGV
LTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTK
ICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALAL
NVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERM
CPIFQISNVSGENMDMLKMFLNLLSSRTSYRDDQPAEFQIDDTYSVPGVGTVVSGTTLRG
LIRLNDTMLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVM
VSPRLCPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMNRDCLRTGDKAS
VHFRFIKTPEYLHCDQRLVFREGRTKAVGTITKLLQSTNNLPSNSKPPQIKMQSTKKAPP
RREDGTAAAGDDAAAQSAGSNAAQPGEGDEDPQIKEGNKENKPKSGGGGRRRGGQRHKGK
GQNSSTNSTAAPSSGTGGS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgattgcggcgtcgcccgagccgggggtgagcccggtctccatggcgctggcc
gatgccttggtccccgccagcatattcgctccggaccggggaggatgcggggacgaaacc
ggggacgagtgctacgacgacggcgacctgatcaacggcgagctggagcaccgcggggtg
gacttcaccaacaagctggcgctggtgagtccgaacggggagcagtatgactcgttactg
cgccagctgcgagacagaatggaggagggctgtggagagaccatctacatggtgggcatg
ggctcagatggcggcgactggggtctgaacgacacggacatggaggcctcggcggccacc
gtgcgctccatgtgcgagcaggtggacgcggacctcatcaccctccgggagcgcaccgag
gccgccggcttggtgcgcgactatctgatccgccggcgtgtgggtgagctggacttcctg
gaggtcagggttgcagtcgtgggtaacgtggatgctggtaagagtactctgctgggagtg
ttaacgcacggagagctggacaatggcaggggctttgcccgccaaaagctcttcagacac
aaacacgagatggagagtggcaggaccagcagtgtgggcaacgatatcctggggtttgac
caggagggacaggtggtcaacaaaccagacagtcacggaggaagcctggactggaccaaa
atctgtgagaagtcctccaaggtcataaccttcatcgacctggctggccatgagaaatac
ctcaagaccacagtgttcgggatgaccggacacctgcccgacttctgcatgctcatggtg
ggcagcaatgcgggtatcgtggggatgaccaaagagcacctgggcctggccttggctctg
aatgtgcccgtgttcgtagtggtgaccaagatcgacatgtgtccagccaacatcctgcaa
gagacgttgaagctgctccagaggttgctgaagtcgcccgggtgcaggaagatccccgtc
ctggtgcagaacaaggacgacgtcatcgtcaccgcttcaaacttcagttccgaaaggatg
tgtcccatcttccagatctccaatgtgtccggggagaacatggacatgctcaagatgttc
ctcaacctgctctcctccaggacgtcgtaccgcgacgaccagcctgctgagttccagata
gacgacacgtactccgtcccgggagtggggaccgtagtgtcggggaccaccctgcgcgga
ctcatacgtctgaacgatacgatgctgctggggccggaccccttgggcagcttcatcccc
atcgcggtcaaatccatccaccgcaagaggatgcccgtgaaggaggttaggggcggccag
acggcctccttcgccctgaaaaagatcaagcgctcgtccataagaaaaggcatggtgatg
gtttccccgaggttgtgcccgcaggccacctgggagtttgaggccgagatcctggtgctg
catcacccgaccacgatatcccccagataccaggccatggtgcactgcggcagcatcagg
cagacggccaccatcttgtctatgaacagggactgcttacgtaccggcgacaaggcttca
gtccacttccgcttcatcaagacccccgagtacctgcactgcgaccagaggctggtgttc
agggagggacgcaccaaggccgtgggcaccatcaccaagctgttgcaatccaccaacaac
ttaccatccaattccaaaccgccgcaaatcaaaatgcagtccacgaagaaggcgccgccg
cggcgagaggacggcaccgcggcggccggcgatgacgcggcggcacagtcagcgggctcg
aacgccgcccaaccgggggagggagatgaagatcctcagataaaagagggcaacaaagag
aacaagccaaagtccggaggaggtggaaggagacgggggggccagaggcacaaaggaaaa
ggccagaacagcagcaccaactccacagcggctccctcctcaggaacaggaggatcctag
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