Gasterosteus aculeatus (three-spined stickleback): 120827423
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Entry
120827423 CDS
T07457
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120827423 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120827423 (hdac5)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120827423 (hdac5)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120827423 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
120827423
NCBI-ProteinID:
XP_040046219
LinkDB
All DBs
Position
XI:2564273..2604717
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AA seq
1141 aa
AA seq
DB search
MLLHPTVSGLCAMLQTIYETESCFSSASADSHHQPLELLSGNRGSSTAMPTAVVEVKSSL
PSGMQSPVGTASEQRGGGGEGGACPGEGPGGGGPVDLRTEARVGSLPVGAAAAVDTAMRE
QQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKVCVCKQQQELLAAKR
QQELEQKRKLEQQRHEEQEKHRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLNKKEP
GIGGLNHSFSPKCWGAQHISLEQGSPPQSNTPGTPPSYKLPPLLGNYDGKDDFPLRKTVS
EPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNSAPGSGPSSPNS
SNSAIANGNTGSVPNIQTELRSLHQTLGADGTLSPLNLYTSPSLPNISLGLPANTHITTA
QALSNQQEAERLAIQSLRGGGALTGKFLSTSCLPAGVGHEVEPPSSHSAHSSLLQHVLLL
EQARQQTTMLAVPMYSQSPLVTAERGASSGMRAVNKLPRHRPLARTQSAPLPQSPQALQQ
LVVQQQHQHFLEKHYKILSKGVDLPRPPPTHPEETEEELTETNDMQEDDEGPSLHRLQKE
GSDDSTHSSERLGVHVKSEEEHGSVHVKGESTESELDEEEEEDDIIQLRECDEEERGSYT
QALQQLGVFQSLLPHRPLGRAQSSPAAPVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHP
EHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHK
KLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFRVAAGELKNGFA
VVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYSDA
SVLYISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNVAWTGGVEPPMGDVEYLTAFRSVV
MPIAQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVIMALEGG
HDLTAICDASEACVAALLGEPCDSGFQWPQEKPCPKAWASLERVIEIQDKHWSCLQSLSQ
TSGHSLSDDPVGARGQSEKDEAETVSAMASLSVDVERPGSDPDNAETSRCTEEPMEEEPV
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcatcccacggtgtcaggattgtgcgccatgttgcagaccatctacgagacg
gagtcctgcttttcctccgccagcgccgacagccaccaccagcctctggagctcctgagt
ggcaacaggggctccagcactgccatgcccactgccgtggtggaggtgaagagcagcctc
ccatcgggcatgcagagcccagtaggaacagccagcgagcagagaggaggaggcggagaa
ggaggtgcgtgtccaggagaaggcccgggtgggggaggcccagtggacctgcggacggag
gccagggtggggtccctccctgtgggcgcggcagctgcggtggacacagccatgagggag
cagcagctccagcaggaacttgtgctcctcaagcagcagcaggagctccagaagcagctg
ctgttcgccgagttccagaagaaacatgaagtgctgacgaggcaacacgaggtgcagctg
caggagcacctgaaggtgtgtgtgtgcaagcaacaacaagagctgctggcggcgaagcgg
cagcaggagctggagcagaagaggaagctggagcagcagaggcacgaggagcaggagaag
caccggctggagcagcagctgctgctgctgaggaacaaggagaagggcaaagagagtgcc
atcgccagcacagaggtgaagcttaagctgcaggagtttcttctcaataagaaagagccc
ggcatcggcggactgaaccattccttctccccaaagtgctggggagcccagcacatctcc
ctggagcagggctctcctccgcagagcaacaccccaggaactcctccctcctacaaactg
cccccgctgctggggaactacgacggcaaagatgacttcccgctccgcaagacagtgtcg
gagcccaacctgaaggtgcgctcgcggttgaagcagaaggtggcagagaggcggagctct
ccactcctccgcaggaaggacgggaccgtgatcagcacctttaagaagagagccatagag
atatcagtctcctctctctgtaatagcgctccaggttctggtcccagcagccccaacagt
tccaactcggctatcgccaatggcaacacggggtcggtccccaacatacagaccgagctg
agatccctccaccagacgctgggggctgatgggacattaagtcctctcaatctctacacc
tcgccctccttgcccaatatttccttggggctcccagccaacacgcacatcacgaccgcc
caggcgctgtccaaccagcaagaggctgagcgtctagccatccaatcgctgcgggggggc
ggagctctaacagggaagtttctctccacgtcgtgcctacctgcaggggtggggcacgag
gtggagccccccagctctcattctgcccattcctcattactgcaacatgtactactgctg
gagcaggccagacaacagactactatgctagccgtccccatgtacagccagtcgccgctg
gttaccgcagagagaggcgcgtccagcggtatgcgggcggtcaacaagttgcctcgccac
cggccgctggctcgtacccagagtgcacctctgccccagtcgccccaggccctgcagcag
ctggtggtccagcagcagcaccagcacttcctggagaaacactacaagattctatccaaa
ggggtggaccttcctaggccgccgccgacacacccagaggagaccgaggaggagctaacg
gagactaacgacatgcaggaggatgacgaagggccgagcctacacaggcttcagaaggag
gggtcagacgacagcacacactcctccgagcggctcggcgtgcacgtgaagagcgaggag
gagcatggaagcgtgcacgtgaaaggggagagcacagagagtgagctggatgaagaggag
gaggaagacgacatcatccaactgagggagtgcgacgaagaggagaggggaagctataca
caggccttgcagcagctgggcgtgttccagtccctgttgcctcacagacctctggggaga
gcgcagtcgtcccccgccgccccggtcaaccccatcaagcacctcttcaccaccggactt
gtgtatgacagtctgatgctgaagcatcagtgtgtgtgcggcaacgctcacatccaccca
gagcatgctgggagagtgcaaagcatctggtcccgactgcaggagacgggtctgttgggg
cgctgcgagaggattcgggggcgaaaagcttctctggatgagatccagtcggtccattca
gagttccacactctgctgtatggaaccagtccgctgaatcgacacaaactggaccacaag
aagctgctgggtccaatcagccagaagatgtacgccgttctcccctgtggaggaatcggg
gtggacagcgacaccgtgtggaacgagatgcactcgtcggcggcggtgcgcatggcggtc
ggctcggtgatcgagctggccttcagggtggcggcgggggagctgaagaacggcttcgct
gtggtgcgtccgccgggccaccacgccgaggagtccaccgccatgggcttttgtttcttt
aattcagtagccatcactgccaagctgctgcagcagaagctgggtgtgggcaagatcctc
atcgtggactgggacattcaccatggcaacggcacccagcaggccttctacagtgacgcc
agcgttctctacatctccctccatcgctacgacgacggaaacttctttcctggcagcgga
gcgccagaggaggtgggatcgggggctggggttggtttcaatgtgaacgtagcgtggacc
gggggagtggagccgcctatgggggatgtggagtacctcactgccttcagaagcgtagtg
atgcccattgcccagcagttcagtccagatgtggtcctggtgtccgcgggcttcgacgcc
gtggagggtcatcagtctccattgggaggctacaacgtctccgccaagtgtttcgggcag
ctaacgcagcttctgatgggtctggcgggcggccgcgtcatcatggcgctggagggaggt
cacgacctcacggccatctgcgacgcatcggaggcctgcgtcgcggcgctgctgggagag
ccgtgtgactcagggtttcagtggcctcaggagaagccgtgtccaaaagcgtgggcctca
ctggagagagtcatagagatccaggataaacactggtcgtgtctccagagtttgtcccag
acgagtggccactcgctatctgatgaccccgtgggggcccggggccaatcggaaaaggac
gaggccgagacggtcagtgccatggcctcactcagcgtcgacgttgagcggccgggctct
gatccagacaacgcggaaaccagcaggtgcacagaggagccaatggaagaagagcctgta
ttgtaa
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integrated database retrieval system
