Gasterosteus aculeatus (three-spined stickleback): 120827456
Help
Entry
120827456 CDS
T07457
Symbol
caskin1
Name
(RefSeq) LOW QUALITY PROTEIN: caskin-1
KO
K21952
CASK-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120827456 (caskin1)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
120827456 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
SAM_1
Caskin1-CID
SAM_2
Ank_3
Caskin-tail
Caskin-Pro-rich
SH3_2
SH3_1
SH3_9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
120827456
NCBI-ProteinID:
XP_040046279
LinkDB
All DBs
Position
XI:complement(3029565..3090589)
Genome browser
AA seq
1593 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSAKKVNVNFQDTDGFSPLHHASLNG
NLELITLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNGQSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTNDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEAVRLL
LESGINATVRNTYSQTALDIVYQFSATQASREIKQLLRDASAALQVRALKDYCNNYDLTS
LNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGLASTVICTQQ
FQKIPLVPPTTVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYSKSPV
TTPLGDTPTAPGCRGSEASPHSPPAACCGPHGGSNEEIWVLRKSVAGGDRSSLGSSGSVT
SVRSSGSGQSAGSTGHVLHAQAEGVKLLATVLSQSAKAKEHLLEQSKSVDQPAGSASSSR
TSSQSGCPLHEAPPYDAAVTRKGEGQAEGKSSEAVVQWLSDFQLQVYAPNFLGAGYDLPT
ISRMTPEDLTAIGITKPGHRKKMTSEINKLSVSEWLPEHKPANLAEWLSAVGLSQYHQVL
VQNGYENIEFITDITWEDLQEIGIIKLGHQKKLMLAVKRLAEMQRGSLRKKPPPITQQQD
VMSADGPPLDEVTSPKLSTFQDSELSTELQSAMTQPGQEVKAQRTRSRDQEEVTAGGGGG
GTAPPKKEARTMRQQSSQGSNSSHRGSVSSQGKHRHPHSQPAPPYTPPHTPTKTRTSSSS
SSTSSVQSTASPQAKHKPCPQFIQGERPQSPRSQPPQSPTQRGPPGPQQQQPAPPEVMEE
PPPRVPLLCLPPEAELAEGEGGESSALQNKRGHPXTDTLASDGECDERAGGGEGREGGGE
AEVAGGPACGAVRGDGVKYATVTHRVSRSHSVRNQDKTLNRYHTQPFALRQKKKGPPPPP
PKRSSSAISTSNSNLTEANAQPHELATTGGMLDVPYLQQRRASDLGMSVGGGSVETSSVG
SVRSIAAMLEMSSIGGGAKGMPLQKIFHQVGKTRDAIGLDGEVVNRRRTISGPVSELVAA
ARREQPTPAXLPSPAVQPEDAPLPENCSAPNPPSSPHPGSAGSSSENLPFADEGSLTIRR
QGRGEGEGQCVFCVCLQGDAEGPQGDGGAAQEDISRVEATATFKRRARSSKPHPNGSDFT
LQESSTVKRRPKSRDKEPEGYADLAANGEPPGGGPPNTTQPAPYQNGTTTVKRRPPSDTG
VTEQPQPQPQASAAPRRDSVDQAAPVGNEGGPARKPKPPVSPKPVVAQIKRQAGPLTPPH
PVSNKRVPLPGPGTPGSPVEGKKIPPPVSPKPAPPPTAPKPAKLIHSMTSPSSPGPAPVQ
QHPAVARQTSSPPCFPPSHIPGPPNAKPLSPSPPSPRTPQTPTTPQTPATPSPTPPPVKP
PRSSIGGVSVDSGMAGGGVTAPAATTPDLDADSLVHQKLEETSASLAAALQAVEDKILLH
EDSVDEQKTTVSILDDIGSMFDDLADQLDAMLE
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggaactgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcagaggcctcggcccgggaaagcaaagctcctcggctcggcaaagaaagtg
aatgtcaacttccaggacacagacgggttttctccgctgcatcatgcgtctctcaatggg
aacctggagctcatcactctgctgctggagtcacaggcagctgtcgacatcagagaccag
aaaggtatgcggccgctgcactacgcagcatggcaggggaaggcggagcccatgaagatg
ctgctgaagtccggctcgtccgtcaacggccaatcagatgaggggcagattcctctccac
ctggcggcgcagcacggccactacgacgtgtcggagatgctgctgcagcaccagtccaac
ccgtgcattgtggacaacgcgggtaaaacacctctggacctggcctgcgagttcggcaga
gtcggggtggtgcagttgttgctgtccagcaatatgtgtgctgccttgctggagcccaaa
aaaggagacaccaacgaccccaacgggacgtctccgctccacctggccgccaagaatgga
cacatagacattatcagactcttgatccaggcgggaatcgacatcaaccgacagaccaaa
gcgggcactgccctgcacgaagccgccctgtgtggaaagactgaggccgtgagactcctg
ctggagagtggcatcaatgccacggtgagaaacacctacagccagactgcactcgacatc
gtataccagttctctgcaacacaggccagcagagagatcaaacaactgctgagggatgca
tcagcggccctccaggttcgggctctgaaggattactgcaacaactacgacctgaccagc
ctcaacatcaaagcaggagacgtcattacggttctggagcagcaccccgacggtcgctgg
aaaggctgtatccatgacaaccgaacaggaaatgaccgcgtgggctacttcccttccacc
atggtggaggtcatcagcaagcgcacaggtttggccagcacagtcatttgcacccaacag
tttcaaaagataccgctggttcctccgacaacggttgcccctgccaacgcggtagtcaac
ggcaacgacaccacgttccatcagatccatatcctgcctccaccgcctcctcctccacca
cattcccatcagccactgcttccacttttcacttcctttggctatagcaagtcgcccgtg
acaaccccactgggagacacacccactgccccaggttgtcgcggctcagaggccagtcct
cacagcccccccgccgcgtgctgcgggccccacggaggctccaacgaagagatctgggtt
ctgcgcaagtcagtggcaggtggagaccgcagcagtctgggtagctctggcagtgtgacc
agcgtgaggtcgtcgggcagcggtcagagcgccggcagtaccgggcacgtccttcatgcg
caggctgagggggtcaagctgctcgccaccgtcttgtcccagtctgccaaagccaaggag
catctgctggagcagtccaagtcggtggaccagcctgcaggctccgccagctcctcgagg
acatcgagccaatcgggctgtccactccacgaggcgccgccttacgacgccgcggtgacc
aggaagggggaggggcaagccgaggggaagagctcagaggccgttgtccaatggctgagc
gactttcagctgcaggtctacgcaccaaacttcctgggcgctgggtatgacttgcccacc
attagccgaatgaccccggaggatctgacggcgatcggaatcaccaaaccaggtcacaga
aagaagatgacgtctgagattaacaaactaagtgtcagcgagtggctgcctgagcacaaa
ccggccaatctggcagagtggctgtctgccgtgggtttgagccagtaccaccaggtgttg
gtgcagaacggttatgagaacatcgagttcatcacggacatcacttgggaggacctacag
gaaataggcatcatcaaactaggccaccagaagaagctgatgctggcggtgaagcggctg
gccgaaatgcagcgcggctccctgagaaagaagccgccgccaatcacacagcagcaggac
gtcatgtcggcggacggtccgcctctagacgaggtcacgtctccaaagttgagcactttc
caggacagcgagttgagcaccgagctacagagcgccatgacccagccgggtcaggaggtc
aaagctcagcgaacgcgcagcagagaccaggaggaggtgacggcaggcggagggggagga
ggcactgcgccacctaagaaggaggcgcggactatgaggcagcagagcagccaggggagt
aactcctcccacagagggagtgtctcctctcaaggcaaacaccgtcacccccactcgcag
cctgccccgccctacacgccccctcacactccgaccaagacccgaacctcatcttcctcc
tcctccacctcctccgtccagagcacagcgtccccgcaggccaaacacaagccgtgcccc
cagttcatccagggggagaggcctcagtcgccgcgctcccaaccccctcagtccccgacc
caacgcggcccgccgggtccccagcaacagcagcccgccccccccgaggtgatggaggag
ccgcccccgcgggtccccctcctctgcctcccaccggaggcggagctggccgagggggaa
gggggggagtcttcggcgctccagaacaagcgcggacaccccnggaccgatacgctcgcc
tcggacggtgagtgtgacgagagggcggggggaggagaggggcgtgagggagggggggag
gccgaggtggcgggaggtccggcctgtggcgccgtgagaggggacggagtcaaatacgcg
acggtgacccaccgcgtcagccgcagccactcggtgcgcaaccaggacaagaccctcaac
cgctaccacacgcagccctttgccctgcgccagaagaagaaagggccgcccccgccgccg
cccaagcgctccagctccgccatctccacctccaactccaacctgacggaggccaacgcg
cagccgcacgagctcgccaccacaggggggatgctggacgttccttacctccaacagcgg
cgggccagcgacctggggatgtccgtggggggcggttccgtcgagacgagcagcgtgggt
agtgtgaggagcatcgccgccatgttggagatgtcttctattggaggcggggccaaaggc
atgccgctgcaaaagatctttcaccaggtggggaagacgcgcgacgccatcggcctggac
ggcgaagtggtgaaccggcggcggaccattagtggcccggtcagcgagctggtggcggct
gccaggcgcgaacagccgactcccgctntccttccgtctcccgccgtccagcccgaagac
gcccctctcccggaaaattgctccgcccccaaccccccgtcctcgccccaccccggctcg
gcgggcagttcgtcggagaacctgccgttcgcggacgagggaagcctgaccatccggcgc
cagggtcgaggagaaggagaaggacagtgtgtattttgtgtttgtctgcagggggacgcc
gagggtccccagggagacggaggcgccgcgcaggaggacatctccagggtcgaggccacg
gcgaccttcaagcgacgggcccgcagctccaagccccaccccaacggctcggacttcacc
ctgcaggagtcgtccaccgtcaagcggcggcccaagagccgcgacaaggagcccgagggc
tacgccgacctggccgccaacggagagcccccggggggcgggccgcccaacaccacgcaa
cccgcgccctaccagaacggcacgaccacggtgaagcgccgcccgccgtccgacaccgga
gtgaccgagcagccgcagccgcagccgcaggcgagcgcagcgccgcggcgggacagcgtg
gaccaagcagctccggtcgggaatgaaggaggtcccgcgaggaaaccgaagccccccgtc
tcccccaagcctgtggtggcacagataaagagacaggccggcccgctgactcccccgcac
cctgtctccaacaagagagtccccctgcccggccccgggacgcctgggagcccagtggaa
ggaaagaagattcctccacctgtctcgcctaagccggcgcccccgcccaccgcacccaaa
ccggccaagctcatccactccatgaccagcccgtcctccccgggcccggccccggtccaa
cagcacccggccgtggcccgacagaccagctcgccgccctgcttccctccctcccacatc
cccgggccgcccaacgccaagccgctgagcccgtcccccccgagcccccgcacgccgcag
acccccaccacaccacagacgcccgccacccccagcccgaccccgccgcctgtcaagccc
ccccgctcctccattggcggggtgtcggtcgacagcgggatggcgggaggcggagtcacg
gcgcctgctgctacgacgccggatcttgatgcggattcgttggtgcatcagaagctggag
gagacgagcgcgtcgctggccgcggcgctgcaggctgtggaggataagatactgctgcac
gaggactccgtggatgagcagaagaccaccgttagcatcctcgacgacatcggcagcatg
ttcgatgacctggccgaccagctggacgccatgttggagtag
DBGET
integrated database retrieval system
