Gasterosteus aculeatus (three-spined stickleback): 120827496
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Entry
120827496 CDS
T07457
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00270
Cysteine and methionine metabolism
gat01100
Metabolic pathways
Module
gat_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120827496 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120827496 (dnmt1)
03032 DNA replication proteins [BR:
gat03032
]
120827496 (dnmt1)
03036 Chromosome and associated proteins [BR:
gat03036
]
120827496 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gat02048
]
120827496 (dnmt1)
Enzymes [BR:
gat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120827496 (dnmt1)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120827496 (dnmt1)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120827496 (dnmt1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120827496 (dnmt1)
Prokaryotic defense system [BR:
gat02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120827496 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
120827496
NCBI-ProteinID:
XP_040046349
LinkDB
All DBs
Position
XI:complement(14187371..14198652)
Genome browser
AA seq
1507 aa
AA seq
DB search
MPSKTSLSLPEDVRKRLQVLDEDGSSGEDHVKEKLKLVQNFLHVDAQDQLNSLEEKMKSS
EMSMDVYLSKVKALLGKELNHENGSHVDSVEHNGKTVLSNGSHKDEHSEDVTMEEEEEAV
KSPTASKGKGGRKSKTNSDNTKSPASTRVTRNAGKQPTIMSMFSKVQKRKSEDLNGDAAN
GENEGKKEEDDAEATREEKRLKVESDETAAPEKSESEITKPVSAAKTPPPKCTDCRQYLD
DSDLKFFQGDPDTALDEPEMLTDERLSLFDSNEDGFESYDDLPQHKITNFSVYDKRGHLC
PFDSGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPINAWWITGFDGGEKALIGFT
TAFADYILMQSSEEYAPIFAVMQEKIYMSKIVVEFLQKNPDASYEDLLNKIETTVPPAGL
NFNCFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSMLLYW
RAARRQAIRHPTKIEKDNKGPTKATTTTLVYQIFDTFFSEQIEQNDKDSAGAKRQRCGVC
EVCQAPDCGKCPACKDMIKFGGGGKSKQACKQRRCPNLAVKEAEDDEIVEEEDVPVEKPK
KVSHPKRKKQTQCKLSWIGETVQTEGKKRYYQKVCVNDEVLEVGDCVSVSSEDPSLPLYL
ARIASMWEDTNEKMFHAHWFHRGTQTVLGESSDPLELVMVDECEDMLLNYVQSKVNVMYK
APSDNWFMEGGMDLEIKVIDDDGKSFFYQFWYDTDCARFETPPKTSPTEDSKFTFCLSCV
RAAEREERERPRAFEPIVDKDHDSKVLYALACFQGEQFKVGDSVYMHPDAFNFSVKPASP
VKRSHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCQRRNGKCDTSEVK
LRLYKFYRPENTHKGVKASYHADINQLYWSDEEVTVNMAELLGRCQVEYAEDLNESVQDY
SSGGTDRFYFLEAYNAKSKSFEDPPNHARSAVHKGKGKGKGKGKGKGKAAAQEQQDSQNE
PQAVKVPKYRALDVFSGCGGLSEGFHQAGMTETLWAIEMWEPAAQAFRLNNPGTTVFTED
CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS
YLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR
RRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDEKRHVSNVTRGNGGIYRTITVRDT
MSDLPEIRNGAAGLEISYNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPL
APGSDWRDLPNLEVRLKDGTMTKKLRYSHSDKKNGRSSTGALRGVCTCSGGTPCDPADRQ
FGTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR
ECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLELKKCVLERMKEEQATDAVKQ
EKIEASD
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaagacctccctgtctcttccagaggatgtcaggaaaaggctgcaggtgctg
gatgaggacggctcttcgggcgaggatcatgtgaaagagaagctgaagttggtgcagaac
ttcctgcatgtcgacgctcaggaccagctgaacagcctggaggagaaaatgaagagttca
gagatgtcaatggacgtctacctctccaaagtcaaggccttgctgggaaaagagctcaat
catgagaatggctcacacgttgacagcgttgagcacaacggaaagactgttttatccaac
ggttctcacaaagacgagcacagtgaagacgtgaccatggaggaggaagaggaggctgtc
aagtcgccaacggcatcaaaagggaaaggtggacgaaagagcaaaacaaattctgacaac
acaaaatctccagccagtacgagagttacgagaaacgctgggaaacagccaaccatcatg
tcaatgttctctaaagttcaaaagcgaaagtctgaagacttgaacggagacgctgctaat
ggagaaaatgaagggaagaaagaggaagatgatgcagaggcgactcgtgaggagaaacgt
cttaaagttgaatcggatgaaactgctgctccagaaaaatctgagagtgagattaccaaa
ccggtctctgctgcaaagacaccgcccccaaaatgtacagactgcagacaatacctggac
gattccgatctcaagttctttcaaggagatcctgatactgcgctcgacgaaccagagatg
ctgacagacgagcgtctttccctgttcgactccaatgaggacggatttgagagctacgac
gatctgccgcagcacaagattacaaacttcagcgtgtatgacaagcgtggccacctctgt
ccgttcgactctggattgattgagaagaatgtggagctctacttcagctgtgttgtcaaa
cccatctacgatgacaacccgtgcttggatggtggagtccctgccaagaagcttggaccc
atcaatgcttggtggattactgggtttgatggtggcgaaaaggctttaattggcttcacg
acagcttttgctgattacatcctgatgcagtccagtgaggagtacgcacccatctttgct
gtgatgcaggagaagatctacatgagcaagattgtggtggagtttctccaaaagaatccc
gatgcttcttatgaggaccttctcaacaagattgagacaaccgtccctccggcagggctg
aacttcaactgcttcacggaggacacgctgctgcgccacgcccagttcgtggtggagcag
gtggagagctacgacgaggcgggcgactctgatgagcagcccatcatagtcactccctgc
atgagagacctgatcaagctggcaggagtcactctggggaagagcatgctgctgtactgg
agagcggccagaagacaggccatccgccacccaacgaagatcgagaaggacaacaagggc
ccgactaaagcgaccactaccacgctggtgtaccagatctttgataccttcttctctgaa
cagatcgagcagaacgacaaggacagtgccggggcgaaaagacagcgctgtggtgtctgt
gaggtttgccaagctccggattgtggcaagtgtccagcttgcaaggacatgatcaaattt
gggggaggtggcaaaagtaagcaggcttgtaagcagagacgatgcccaaacctcgccgta
aaggaggctgaagatgatgagattgttgaggaggaagatgttccagtggagaagccaaag
aaggtttctcacccgaagaggaagaagcagacccagtgcaaactgtcgtggatcggcgag
accgttcagactgagggaaagaagcgttactaccagaaggtctgtgtgaacgacgaggtg
ttggaggtgggcgactgcgtctcggtttcatcagaggacccatcgttgcctctgtacctg
gcacgcatcgcatcaatgtgggaggacaccaatgagaagatgttccatgcccactggttc
catcgtgggacccaaacggtgttgggagaatcctccgatccgctggagctcgtcatggtg
gacgagtgtgaagacatgctgctcaactacgtgcagagcaaagtcaacgtcatgtacaag
gccccgtctgacaactggttcatggagggaggcatggatttggaaatcaaggtgattgat
gacgacgggaagagtttcttctaccagttctggtacgacactgactgcgcccgctttgag
actcctccaaagacgtcgccaacggaggactcaaagttcaccttctgtttaagctgcgtt
cgggccgcagagagggaggaacgggaaaggcctcgtgcatttgaacccatagtggacaaa
gaccatgactccaaggttctctacgctctggcctgcttccagggggagcagttcaaagtg
ggagacagtgtctacatgcatccagacgcgttcaatttcagcgtgaagccagcgagtccg
gtgaagcgctctcataggaaggaggatgtggatgaggacttgtacccggaatactaccgg
aagtcctccgactacatcaaggggtccaacctggacgctccggagcctttccgcgtcggg
cgcatcaaggagatcttctgtcaaagacgcaacgggaaatgcgacacgtcggaggtcaaa
ctgcgactctacaagttctacaggcctgagaacactcacaaaggtgtcaaagccagttac
cacgcagacatcaaccagctgtactggagtgacgaagaggtcacagtcaacatggcagag
ttgctcggccgctgccaagtagaatatgcggaagacctgaatgaatcggtccaggactat
tccagtggtggaaccgaccgcttctatttcctggaggcctataatgcaaaatcaaagagc
tttgaagatcctccaaaccatgcacgctctgctgtgcataaaggcaaaggaaagggcaaa
gggaaaggtaaaggcaaaggaaaggctgctgcacaggaacagcaggactctcagaacgaa
ccacaggcggttaaagtgcccaaatatcgcgccctggacgtgttttctggctgcggcgga
ctctctgaaggcttccaccaggctggtatgacagagactctgtgggccatagaaatgtgg
gagccggcagcacaggccttcaggctcaacaaccccggcaccacggtgttcacggaggac
tgcaacgtgctgctcaagctggtcatgtcgggagagaagaccaactctctgggccagaag
ctgcctcagaagggcgacgtggagatgctgtgcggggggccgccttgccaaggattcagc
ggcatgaaccgcttcaactctcgcacctactcaaagttcaagaactccctcgtggtctct
tatctcagttactgtgactactacagaccaaagttcttcctgctggagaacgtcaggaac
tttgtttccttcaaaagctcgatggtcctgaagctgactctacgctgtctggtgcgcatg
ggctaccagtgcaccttcggagtccttcaggccggtcagtacggcgtcgcccagacgcgc
cgcagggccatcatcctggctgctgctcccggggagaagctgccccgctaccccgagcct
ctgcacgtgttcgctcccagagcgtgttccctgagcgtggtggtggacgagaagagacac
gtcagcaatgtcacacgaggcaacggaggaatctacagaaccatcactgtcagagacacc
atgtctgatctgccagagattcgcaatggtgccgctgggctcgagatctcttacaacgga
gagccgcagtcttggttccagaggcagatccgagggactcagtaccagccgatcctcagg
gatcacatctgcaaggacatgagcgctctggttgaaggccgcatgcgtcacatcccgttg
gctcccggctccgactggagggatctgcccaacctggaggttcggctcaaagatggcacc
atgactaagaaactgcgctactcccactcggataagaagaacgggcgcagcagcaccggc
gctctcagaggggtctgcacctgttcaggagggactccgtgcgaccctgctgatcggcag
ttcggcaccctgatcccgtggtgtctcccccacaccggaaaccgccacaaccactgggcc
ggcctctacggcaggctggagtgggacggcttcttcagcacgacggtcaccaacccggag
cccatgggcaagcagggtcgtgttctgcaccccgagcagcacagagtggtcagcgtgagg
gagtgtgctcgctctcagggattccccgacacgtaccgcttctttggaaacatcctggac
aaacaccgacaggtcggcaacgcggtgccgccaccgctctccagagccatcggcctggag
ctgaagaagtgtgtcctggagaggatgaaggaggaacaagcaacagatgctgtcaaacag
gagaagattgaggcctcagactag
DBGET
integrated database retrieval system
