Gasterosteus aculeatus (three-spined stickleback): 120827573
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Entry
120827573 CDS
T07457
Symbol
hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
gat04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120827573 (hcrt)
04081 Hormone signaling
120827573 (hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120827573 (hcrt)
Cytokines and neuropeptides [BR:
gat04052
]
Neuropeptides
GPCR binding
120827573 (hcrt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
120827573
NCBI-ProteinID:
XP_040046506
UniProt:
A0AAQ4QF00
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All DBs
Position
XI:6578254..6580110
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AA seq
169 aa
AA seq
DB search
MWAPQSNIRDYSSPGGDQMTPSHSSQKMPWFPINLHKASGMDTSNRKFLALALMLLLSHV
ACEAHSLSQCCRQPARSCRLSVILCRSGSKNFGGELPGDDAAGILTLGKRNEEEHNLQSR
LNQLLQGSRSQAAGILTMGKRIAERAGEQYMAWLAQSGWTITTPLPDLS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaccacaaagcaatataagagactattcttcccccgggggagatcagatgact
ccgtcccacagcagccagaagatgccgtggttccccatcaacttgcacaaagcctccggg
atggacacctctaacaggaagttcctggcactggccttgatgctgctgctgtcgcacgtg
gcctgtgaagctcacagcctgtctcaatgctgcagacaaccggcccgctcctgccgcttg
tccgtgattctgtgtcgctctggcagcaaaaactttggtggcgagcttccaggtgacgac
gccgccggcatcctcactctgggcaaacggaacgaagaggagcacaacctgcagagccga
ctcaaccagctcctccagggctcccggagtcaggcggccgggatcctgactatgggcaag
aggattgccgagcgggccggggagcagtacatggcctggttggcccagtcgggatggacc
atcacaacgccgctccctgatttaagctaa
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