Gasterosteus aculeatus (three-spined stickleback): 120827642
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Entry
120827642 CDS
T07457
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120827642
03015 mRNA surveillance pathway
120827642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120827642
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120827642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120827642
NCBI-ProteinID:
XP_040046640
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All DBs
Position
XI:complement(10407733..10411125)
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AA seq
277 aa
AA seq
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MAPSPTKRKEEEKTKDRGKEKTGTREGDKERGREKARKHRSASTGSSSRSSSSSSSSSGS
SSGSSSGSSSSGSTRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGDDKE
RRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVDMPMDRVHPHLSRGYAYVEF
ESPDEAQKALKHMDGGQIDGQEISASAVLTQRVRPPPRRPSPPRRMPPPPPMWRRSPPRM
RRRSRSPRRRSPPRRRTRSRSPGRRRHRSRSSSNSSR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcaccgactaagcgaaaggaggaggaaaaaacaaaagacagaggcaaagaa
aaaactggtaccagggaaggagataaggagagaggacgggagaaagctaggaaacatcgc
agtgcctctactggcagcagcagcagatctagctcatcttcaagcagcagctctggttca
agctcaggttcctcaagcggatccagctcatctggatccacccgctctggttcttcaagc
tctcgttcctcctcatcttccagctcctcgggctcccccagcccgagtcgtagacgccac
gataaccgccgccgatcccgctccgcgtccaaaacacaaaagcggggagatgacaaggag
cgaagaaaaagaagcccaagccctaaaccaaccaaagttcacttagggcggctgaccagg
aacgtcaccaaggaccacatccaggagatattttccacttatggaaaaatcaaaatggtt
gacatgccaatggaccgtgtccaccctcacctgtccaggggctatgcttacgtggagttt
gagagtcctgatgaggctcagaaggccctcaaacacatggatggaggtcagattgatgga
caagaaatcagtgcatctgctgtgctgactcaacgagttcgtcccccacctcgcagaccg
tctccccctcgcaggatgcctccgccgccacctatgtggcgccgcagtcctccacgcatg
cgcagaaggtctcgctccccgaggagacggtccccgccacgtcgccgtactcgctcaaga
tctcctggtcgtagacgccaccgttctcgctccagctctaactcctccagatag
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