Gasterosteus aculeatus (three-spined stickleback): 120827670
Help
Entry
120827670 CDS
T07457
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120827670
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120827670
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120827670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
ANCHR-like_BBOX
Syntaxin_2
CorA
Helicase_IV_N
PilJ
Lectin_N
Motif
Other DBs
NCBI-GeneID:
120827670
NCBI-ProteinID:
XP_040046673
LinkDB
All DBs
Position
XI:9677899..9682499
Genome browser
AA seq
519 aa
AA seq
DB search
MATASSSNEETLKDSQHTMDVEEEPRDPAVETSAIMPPQDVLCDSCMDSPGKALKSCMTC
LVSYCEAHLRPHLENAKFQNHRLVDPLQDVDRQTCEVHRRPLERFCLTDRCCLCLECEDR
EHEGHPTASVGEARTQIETELQKNQEAINQTASATEKEIGKLQSDNDFIKSSVQEVCATV
LQQFARLQTTLEEARRGLVDGLEAEQRKSLRRAESIQAHLERRKTGLMKTLARMNKLSRS
KSDVDFLQEYSEWKIGSEDVSLPSPNIDHMDHLLSYLQVVTDSTQELCDLILSSNKLTIC
KSGTKSWMPECEPSLLPDPETPEDFLKYARSLTFDPDTVHRFLRVTEDNRKLTNTSPWQH
AYPEHPSRFEYWRQAMTSDSIYLGRHYVEAELSGEGAHVGVTYKSIDPKGEQSTSCITGN
DFSWCVGRNSRGFFAWHAGVEEALDATDVTRLGLYVDFHRGSVSFYDAAGPMRRLHNYTA
DFIEPLHITAWLSKKDNAVHLVNDKLCNETNHLPSLPVC
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcaagcagtagtaatgaggagaccttgaaggacagtcagcacaccatggac
gttgaggaagagccgagggatcctgccgtcgagacgtccgccataatgcccccgcaagat
gtactatgtgactcgtgcatggacagcccaggcaaggccctgaaatcctgcatgacctgc
ctggtttcttactgcgaggcccacctcagaccccatctggagaatgccaaatttcagaac
catcgtctggtggatcccctccaggacgtcgaccgtcagacctgtgaagttcatcgccgt
cctctcgagcgcttctgtctgacggacaggtgctgtctgtgtctcgagtgtgaggaccgc
gagcacgaagggcacccgactgcatctgtcggggaggcacggacacagattgagactgag
ctgcagaagaaccaagaagcaatcaatcaaactgcctcagcaaccgagaaagagatcgga
aaactgcagagtgacaatgacttcattaagtcgtcagtgcaggaagtctgtgctactgtc
ttacagcagtttgccaggctgcagacaaccctggaggaggccagaagagggctggtggac
gggctggaggccgagcagagaaaatccctcagacgggcagagagcatccaggcacatctg
gagcggaggaaaacagggctgatgaaaactttggcccgaatgaacaaactgtcaaggagc
aagtctgatgtagacttcctgcaggagtattcagagtggaagataggctcggaagatgta
agtctgcctagtccaaacatcgaccacatggaccatctactgtcttacctccaggtagtg
acggattccacccaggagctgtgtgacctgatcctctcctcaaacaaactcacaatctgt
aaaagtggtactaaatcctggatgccagaatgtgaaccttccctccttcctgatcctgag
acgccggaggacttcttaaaatacgcaaggagtttaacctttgacccagacaccgtccat
cgattcctacgtgtaacggaggacaaccgaaagctgaccaacaccagcccctggcagcac
gcctacccagaacaccctagtcgcttcgaatattggcgtcaggcaatgacttcagacagc
atttacctcgggaggcactatgttgaagccgaactgagcggggagggtgcacatgtagga
gttacgtacaagagcatcgatcctaaaggagagcaaagcaccagctgcatcactgggaac
gacttttcctggtgcgtggggaggaacagccgaggcttctttgcctggcacgccggtgtg
gaggaggccttggatgccacggacgttacgaggctcggcttgtatgtcgactttcaccga
ggctctgtgtctttttacgatgccgccggtccgatgaggcggctgcacaactacactgct
gatttcatagagcccttacacattactgcctggctgtcaaaaaaagacaatgcagttcat
cttgttaatgacaaactatgtaatgaaacaaatcatctgccttcgctgccagtttgttaa
DBGET
integrated database retrieval system
