Gasterosteus aculeatus (three-spined stickleback): 120827758
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Entry
120827758 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120827758
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120827758
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
U-box type E3
120827758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120827758
NCBI-ProteinID:
XP_040046800
LinkDB
All DBs
Position
XI:complement(15592617..15604782)
Genome browser
AA seq
1615 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGPHVTLRELKRQIMGREKLRAGDCDLQITNAQSKEEYKDD
ECSIPKGSSVIVRRIPVVGSKPSSSKTRHVERSDGQTHQAFGAYRAMEDQSSSRALPLFS
KMANLADVDGSEEDKIKVMINQSTYDAMNYNKKFGTVLPANYTCYRCGNTGHHIRDCPII
GDKNCDAPARIKKSTGIPRSFMVEVDDPNTKGAMLTNCGRYAIPSIDIAAYAIGKKERPP
FVAQEQPKSEEEEEPVPEELLCGICHDLMSDAVVIPCCGNSYCDDCIRSALLDSEDHVCP
TCRQLDVSPDTLIANKFLRQAVETFKKERGYTKSLARGCGASQSQNPTPAASPVPTAPHL
GVPSQPQKPHLSTQQDPLRSQAADTSPPPQVCAAPPAATSPASSPTTPSTDLQPEQIQPE
EPDREAEEKTNDDDDAAAPSPKPPTDAPSQLIPLVNLTPLAEEPQAAGVDLEQPPSGPAP
KRSAPSTCWESSSSSSPLCPTGGWSESGLQQLRPSFSPYPATPPPPLFPPPHFHTFLAAQ
QPLSGFPPGYPPPTPLWTLPNLQGAPIPSLCPSTAIPALIPKEWYRHQTKKERSPHRESS
SRRSSSRSDPKSSKFKPSRSSSRSRSRSRSHGRSRPPSRHKDLHSRSHSSRSYSFGYKRS
PTPSSSSSPRGGYRSRHKSPADPRQRSGHHSRHHGKKSASGGGGGSGSASRRRGEDDERE
AGASGGSLPGHLYAQHANPSGGLDRERYLRWSREYKEWCDKYFSSYVGHFHQLPLPLLNI
PPPPQWEDGEGSANRSDYGGRRRGRRAARTEGRSPPSRSSSDSRSPPSRSSRDSRSTLSQ
SSSDSHSSPSCSSGSLSSPSRSSSDRRSTPSKGGVQPRAQSGAGSCAGPPVTKSGEDEKH
EDVKALGRLGTLKQQPKKKRAEGGDEESSSLDAADSADDCREDRRRRGAGPKAFRDGAPA
RDERTTGDALEPARPLAQPERRRDKEYERRRREHRHVEVEKGRRRGKHSDSRQDVGRRHK
ETDTRRTDRPPTGSTDSRSHRSRKRKGEERERSSLRAENSKCLKTNTAEEPKSRRSESLN
PLDKKTPKAEQKKERKALPLTERDVWEGGISVKPQKKISININLEGKRSEEKTEKQPFSY
FDNAKEEVKEAGQKEKSNGDTDTEANEKTESSREVEGLSEENVQPNEEARQKWEKATFRD
DKGATLEKTATPALRAEETTEQGQLLWDEGDGTEASKGGEVRNTRSVRGGDAGPATGEST
LAENKGNSPGESKDVPMEGGEWRMWEDKEDEYRSKCQSSISEIHQDGAKPPREDGSGHGD
PRGRGEEEEEVKALEEGGEDRAADQEDELIKVAHKVDKGEPEEDERVEGAAKAQTEAPSL
VLPPSSVRVTSQTTANRERDDEEKRETERGREIQKTPVWSSSHRSGAPSGGRDRKDSTVH
SDRDRERRRDRDRGREGERPGGGQRESRRSTERARDEDRGRGRERERKHASVSAQKRDLP
SSSSSRSRSHDTERGGWQRGGDPGDARSSPRPGRKFPPGRSRESGAMSRAPELADQNPHR
SCRDTLVSKDPPDRPLPACPPSQPESRKRRAPLRVRAQNHRSGITAQQRRGRGAA
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcactacaaattctcctccaaactcagctacgacacggtggtgttcgac
ggcccgcacgtcacgctgcgggagctgaagcggcagatcatgggcagggagaagctgcga
gccggcgactgcgacctgcagatcaccaacgcgcagagcaaagaagagtacaaagacgac
gagtgttcgatccccaaaggctcctccgtcatcgtcaggaggatcccggtcgtcgggtcg
aagcccagctccagcaagacccgccacgttgagcgatcagatggccagactcaccaagcc
tttggagcctacagagcaatggaggaccagagttcttccagggctttgccccttttctca
aagatggctaacctggctgatgtagatgggtcagaggaagataagattaaagttatgatt
aatcagtctacctacgacgccatgaattacaacaagaagtttggtactgtacttcctgcc
aactacacctgttatcgctgtggaaacaccggacaccacatcagggactgtcccatcatc
ggggataagaactgtgatgccccggcgagaatcaagaaaagcaccggcatccctcgttcc
ttcatggtggaggtggacgatcccaacacgaagggcgccatgctgaccaactgtggacgc
tacgccattccttccatcgacatcgcggcgtacgccatcggcaagaaggagaggcctccc
ttcgttgcccaggagcagcccaagtcagaagaggaggaggagccggtgcccgaggaactc
ctgtgtgggatctgtcacgacctgatgagcgacgctgtggtcataccctgctgtggaaac
agctactgtgacgactgtatccgcagtgctctgctggactcagaggaccacgtctgcccc
acttgtcgccaattggatgtctctcctgatacgctgatagcaaataagtttctccgacag
gctgtggagacctttaagaaagagcgaggctacactaaaagtctggcaagagggtgcggc
gcctcccaatcccaaaatccaaccccggcagcgagccctgtccccaccgcgccccacctc
ggtgtgccgagccaaccgcagaagcctcatctgtcgacccagcaggaccctctccgctca
caggctgcagacacgtcgccaccgcctcaggtgtgtgcggctccgcccgcagctacaagc
cccgcctcttcccccaccacaccgagcactgacctccagcctgagcaaatccagccggag
gaacccgacagagaggctgaagagaagacaaacgacgacgacgacgctgctgctccgtcc
ccaaagccccccaccgatgccccttcacagctgatccccctggtgaacctgactccgctg
gcggaggagccgcaggcggccggcgtggatctcgagcagcccccctcaggtcccgccccc
aagcgctcggcgccatcgacgtgctgggaaagctcctcctcctcctcccccctctgtccc
actggaggctggagtgagtccggcctccagcagcttcgtccctctttctccccctatccg
gcgactcctcctcctcctctcttcccgccgcctcatttccacacattcctggccgcccag
cagcctctcagcggtttcccccctggataccccccccctacgcccctttggacactgcca
aacctccagggggcccccatcccttccctgtgcccctctaccgccataccggccctcatc
cccaaggagtggtaccggcatcagacgaagaaggaaaggtcccctcacagagaatcctcc
agcaggcgctcctcctcccgatcggatccaaagtcctcaaagttcaagccttctcgctct
tcgagcaggtccaggtcccggtctcggtcccacggccgatcaaggccgccctcgcgccac
aaagacctgcacagccgctctcactcctcccgctcctacagctttggttacaaacgttcc
cccacgccgtcctcctcgtcctcgccgcgaggcggctaccgctccaggcacaagtcgccg
gcggacccccgccaaagaagcggccaccacagtcgccaccacggtaagaaatccgcttcg
ggcggcggcggcggcagcggctccgcctccaggaggcgaggggaggatgacgagagggag
gcgggagcctcgggggggagcttacctggacacctgtacgctcagcacgccaatccgagt
ggcggcctggacagagagcgctacctgcggtggagccgcgagtacaaagagtggtgtgat
aagtatttcagtagctacgtcggccacttccaccagctgccgcttcccctcctcaatatc
ccccctcccccccagtgggaggacggggaaggaagcgcaaaccgctctgactatggcggc
cgacgccgcggacgacgcgccgctcggacggagggccgctcgccgccatcgcgctcctcc
agcgacagccgctcccctccatcgcgctcctcgagggacagccgctccacgctgtctcag
tcgtccagcgacagccactcgtctccgtcttgttcgtccgggagcctgtcctcgccgtct
cggtcgtccagcgaccggcgctccacaccgtccaaagggggtgttcagccgagggcacag
agcggcgccgggagctgcgccggcccgccggtcacaaagagcggggaggacgagaagcac
gaagacgtgaaagctttggggagactcggcaccttaaaacagcagccaaagaagaaacgc
gccgaaggaggagacgaagagtcctcgtccctcgatgctgctgactcggcggatgactgc
agggaggaccggaggaggcgcggcgccggaccaaaagccttcagggacggcgctcctgcg
cgggacgaacggactaccggcgatgccttggaacctgcccggccactcgcccaaccagag
agacgccgggataaagagtatgagagaagacgcagagaacacaggcacgtggaagtggag
aaaggacggagacgaggcaaacattccgactccaggcaggatgtggggaggaggcacaaa
gagacggacacgcggcgcactgacagaccgccaaccggcagcaccgactcgagatcacac
cggagtaggaaaagaaaaggagaagagagagagagaagttctctcagggcggaaaacagc
aaatgcttgaaaacgaacaccgcagaggaacccaaaagccgcaggagtgaatccctgaat
ccacttgacaagaagacgccaaaagcggagcagaagaaagagaggaaagctttgcctctg
acggagagagacgtctgggagggggggataagtgtgaaaccacagaagaagataagcatc
aacattaacctcgaaggaaagcggagcgaagagaaaactgaaaagcagccgttttcttat
ttcgacaacgcgaaggaagaagtcaaggaggcaggacagaaggagaagtcaaacggagac
acagacactgaggcaaatgagaagaccgagtccagcagagaagtggaaggtctgtctgaa
gaaaacgtccaaccaaatgaagaagcaagacagaaatgggagaaagctaccttcagggat
gataagggagcgacgttggagaaaacggcgactcccgccctcagagcggaggagacaacc
gaacagggtcaactgctgtgggacgaaggagacgggacggaggccagcaaagggggagag
gtgaggaacaccaggagcgtgaggggaggagatgcaggaccggcgacgggagaaagcaca
ttggcggagaacaagggaaactcgccgggggagtcaaaggacgtcccgatggagggagga
gagtggaggatgtgggaggacaaggaggacgaatacaggtccaagtgccagagcagcatc
agcgagatccaccaagacggagcgaagcccccgagggaggacggcagcggccacggggat
cctcggggtcggggggaggaggaggaggaggtgaaagctctggaggaaggcggcgaggac
agagctgccgaccaggaggacgagctcataaaggtcgctcacaaggtcgacaagggagag
ccggaggaagacgagcgggtcgaaggagcggccaaagctcaaacggaggctccgtcattg
gttctcccgccgtcctccgttcgtgtgacatcacagacgactgccaacagggagagagac
gacgaagaaaagagagagacggagagaggaagagaaatccagaaaacccccgtttggtcc
agttcacaccgaagtggggctccctccggcggcagagacagaaaggacagcacggtgcat
tcagacagagaccgggagagacggagggacagagacagagggagggagggcgagagacca
gggggagggcagagagagagcagaagatcgacagagcgggcgagggacgaagacaggggg
aggggccgggagagagagcggaagcacgccagcgtctcggcccaaaagagggatctccct
tcctcctcctcctcccggtcgaggtcacatgacaccgagaggggaggctggcagcgaggg
ggcgacccgggcgatgccaggagctcgcctcgtcccggcaggaagttcccgcctggcagg
agccgggagagcggcgcgatgagcagagctcccgagctggccgatcagaatccccacaga
tcatgcagagacacgttggtgtctaaagaccccccagacagacccctccccgcctgccct
ccctcgcagccggagtcgaggaagagacgcgcccccctgcgggtcagagcccagaaccat
cgatccgggatcactgcacaacagaggcggggacgaggagccgcgtga
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