Gasterosteus aculeatus (three-spined stickleback): 120827803
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Entry
120827803 CDS
T07457
Symbol
shank1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
Ank_2
Ank_4
SAM_2
PDZ_6
Ank
PDZ
FERM_f0
Ank_5
SH3_2
SAM_PNT
SH3_1
Motif
Other DBs
NCBI-GeneID:
120827803
NCBI-ProteinID:
XP_040046846
LinkDB
All DBs
Position
XI:complement(13960931..14010458)
Genome browser
AA seq
2514 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNRHPYPGGEEEEEEEEEEEEEMEEDERDVDQEEEENGELDG
EEEDEEEEVVEEVRRGGLSRVGRGEGHRQPGKPTGRPPGDRQIRSGNPGHATNPYSSNPA
PTHQPPANHVQQQPQRRLKERNTGTTSSEDAHVAMMVFRIGIPDIKQTKCLRFNPDATVW
KAKQQVLCSLTESLRDVLNYGLFQPATDGHDAMFLEEERLLRDYPQSFEKGVPYLEFRYK
TRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFLEKGLDPNYQDADTGETAL
SLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPVHKAVRGHRHTALLVLLSLGASPDYK
DRRGLTPLYHTVLTGGDTSCCETLLYHHAKLGIRDENGWDETHQRLCMCCLCVYVNKNRN
IHAMKHSRLPPFISDTFHPSSHPPCFCGSEVDGTNRASSSSSSSSSSVSSSALHQGLLSA
RDLHLILSLRASMHTMSVIIQLMQSMFANRRCLLQESCSRILLYRGANKETKNNNGQTCF
QVAVMSGHFELGEIIKNHRDTDVVPFVESPKFQRQRRESTRSLTIPHPHPFLRGNSDSSM
NLPDWMAVPNAPGTNIVSVQGYKHTGALRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQ
APAPASAAAQTAGQRRRLYSALPGRVFVATRSNSAQGEREISFSKGDRVKVLKVGKAGFE
RERPGRKGLVPLQLREEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEK
SVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFL
IEVNGQNVVKVGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLNTPAI
ALRSKSMTSELEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTIS
TNEAPGTRGQGPKRDRGRSFYGNEQNYGDPSGMGVMPSGLGLGYDRGLYNSGHGPKHGMR
RQKSIGVPEEERQSLHPPAMKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGWRAKSS
QQPVSVSQSTSTPAHYQPYSQAAHFTHGGRERSGSSGTGPGGGAVDHATPYAHATAHTAQ
SRTASRKVAYSGEPGGAGPGAGGGXKTAGLRRGYSNAILPSSSATVMPQQQQTTPSQPQR
TDRSAAGPGAGGPKGGARRGKGPLVKQSKVEDLRMAQGTLGGKGSVEKSSIPIPTIIVKA
PSTSSSGRSSQGSSVEADAPASGETDEAKTPHGPPPSTPAPQPPAPPSIPAPPPPYLPSM
RAQDNLDFTSQFGAAIVGAARRDRERLHEARRKSASLFMSAEEDVSVGVSDGITRTQASQ
QQLSTQAESSSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSVPT
DLYTAAGRQPASSGTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGAEHHFSR
QMSSAAFPSSTVNSQPVSSTAQSSSSSYLVTSSSLAATTASVGRPPSPRILRGVGSVWSE
EGGGGDREREGGGAREGLRVRFSEDKTVHTHHYQSQPYQSTYKERERERSRERDRSRERE
ASRERERDKEREDYMRRAEQAAESSVQHASQTHQPARPSFLRMENQADAYILSLTPPSPP
PNGSQQTANTTGSSGTGLMVLPPPAPSIDADDEFVYADPLPPPLQFANSFDRGTGGLSGY
SQHGMRPNSLTSRQQQVPPPPPPPPPPPPPIKEAGGFHAHTPLPSPQAGDSTASSLTSYD
SEVANLTQSAPSPSQTSPNPPPPHSPSTLHPTSSTGPPPPPSVSPPPPPGSYHRPFSVSH
HLYNSSHTPGRSSPTPPPHTVAPPPGYRGTPAPTSTAATSAPHRGTFSHAMTASCAATTT
TCTSTQLYQERTHTGHQTHTTSSTATTGGRRTGEHHPSLTLLPRKGESQETVVDSGIEEL
DSRSSSDHHLDSILASVRGDRLDRGERGGRTGGGGGTGELERGGDFLESYMSYLDGQTFE
MQNATAAVSTYPKANRFREGGRTSDLHRQTSTAPASFHSHRRRDEQEDDEEGADESSRDG
YGGSDMQNLGRPISPYFDRPRTPEIKPLWGEGQMAADQSAAILEGKKVYPPASSMKPSII
NELNSKLQQRTKDSWHSQSPLGRHRARNRFSEDSASALSPPSARSQSPSPISLSQPSLSP
SPTPASQYPNWGRSPSPQPPAASQPPRSHSPISPTSYAPYPTSPKHRPVYRTKALEFQFI
PSRESRKAESHMFQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAMYDLRGSITP
PSPGNPLGDPYFSPSPPLFAASGAPPPPNSALVVSRSLSPTHFLSGASSPPMHPHTPPTC
LSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKD
DFLDLGVTRVGHRMNIERALRTVLDRLASSPFPILVLSPREGPTERRRDDGSRS
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgttcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaat
cggcatccctacccagggggagaggaggaggaagaggaggaggaagaggaggaggaggaa
atggaagaagacgagcgtgatgttgaccaggaggaggaggagaacggcgagctggacggc
gaagaggaagacgaggaggaggaggtggtcgaggaagtcaggcggggcggcctatcgcgt
gtgggcaggggggagggacacaggcagccaggtaaaccgaccggaagaccccccggggac
agacagatccggtcaggaaaccccggacacgccacaaacccctattcgtccaatcctgca
ccaacgcaccaaccaccggccaatcacgtgcagcagcagccgcagaggcggttgaaggag
cgcaacaccggcacgacgtcatcagaggacgctcacgttgccatgatggtgtttcgcatc
ggcatcccggacatcaagcaaacgaaatgtttgcggttcaacccggacgccacggtgtgg
aaggccaagcagcaggtgctctgctccctgaccgaatctctgcgggacgtcctgaactac
ggtctgttccagcccgccacggacggccatgacgccatgttcctggaggaggagaggctg
ctcagagactacccgcagtcctttgagaaaggggtgccatatctggagtttcgatacaaa
accagggtgtacaaacagaccaatctggatgagaagcaactggccaagctgcacactaag
gccagcctgaagaaattcatggattatattcaaaccagcgctgtggacaagatggccaag
ttcttagagaaaggcctcgatcccaactaccaggatgccgacaccggcgagactgccctg
tccttggcggtgcagtgtgagccgggtggaggtgaggccatccgcgtcctggtggaggga
ggtgctcacattgacttccgcgccaaagacggactcacgcctgtgcacaaagctgtgcgg
ggccaccgccataccgcccttctggtccttttgtccctgggtgcgtctccggactataag
gaccggcgagggctgacgccgctctaccacactgtgctgacagggggcgacacctcctgc
tgcgaaacactgctttaccaccacgccaaactaggcatcagggacgagaacggctgggac
gagacacatcagcgtctgtgtatgtgctgcctctgtgtctacgtcaacaaaaacagaaac
attcatgccatgaaacactcccgcctccctccattcatctcggacacctttcacccttca
tcccacccgccttgcttctgtggcagtgaggtggacgggacgaatcgagcctcctcctcc
tcctcctcctcctcctcctcggtgtcgtcctcagcgcttcatcagggtctcctcagcgct
cgtgacctccatcttattctgtctctgcgtgcgtcaatgcacacaatgtcagtaattatt
caactaatgcaatcaatgttcgctaaccgccgctgtttgttgcaggaaagctgttcacga
attcttctctatcggggagcgaataaagaaacaaagaacaacaacgggcagacgtgcttt
caggtggctgttatgtccggccattttgaactgggagaaattatcaaaaaccaccgggat
acagatgtggttccctttgtggagtctccaaagtttcaacggcagaggcgggagagcacc
cgttctctgacaataccccaccctcatcctttcctccggggcaacagtgacagcagtatg
aacctgcccgactggatggcggtgcccaacgccccagggaccaacatcgtctctgtgcag
ggctacaagcacacaggagccctgcggagctccagcagtcccagaggggcgaggacacgt
tctccatcccgagggaggatcggagacaaggaggaccggagcaggcagagtcggagacaa
gcgccggctcctgccagcgcagccgcacaaaccgcaggccagcgaagacgcctctacagt
gcgctgccgggacgcgtctttgtggccactcgatcgaactcggcccagggagagcgagaa
atcagcttcagtaagggagaccgggtcaaagtattaaaagttgggaaggcgggatttgag
agggagcgcccgggtagaaaggggttggttcccctccaactgcgggaggaagtgatgctt
cggagccaagacaaccgatcagagagccgtggagaacgagccaaaaggctcttccgccat
tacactgtgggatcctatgacagctttgacgctcccagtgactatataatcaaggagaag
tcggtgcttctgcagaaaaaggacagcgagggtttcggctttgtgttgcgaggggccaaa
gctcagactcctattgaggagttcaccccgaccccggccttccccgccctgcagtacctg
gagtcagtggacgagggaggcgtcgcctggagggccggtctcaggatgggggatttcctc
atagaggtcaatggacagaatgtggtgaaggtcggtcaccgacaagttgtcaacatgatc
cggcaaggtggcaacagcctcatggtaaaggtagtcatggtaacccgaaaccccgacatg
gaggagggttcgaggaagaaaatcccccagcagagtaagaggctgaacactccggccatc
gccctacgatccaaatccatgacttcagagctggaggagatggtggagagagctgctacc
ccttggaaaaaaaaatcagaattcgaatcctcacaagttacagagaagaagaggacagtc
tatcagatggctttgaataaactagatgaaattcttgcagcagctcagcagacaatcagc
accaacgaggcaccggggacacggggacaggggccaaaaagagacagaggacgaagtttc
tatggcaatgagcagaactacggcgatccgtccgggatgggggtgatgccgtcggggttg
ggcctcggctacgaccgcggcctgtacaactcaggtcacggcccaaagcacggtatgcgg
cggcagaaatccatcggcgtgcctgaggaggagaggcagtcactgcatcctccagccatg
aagttcgctcgcagtctgtcggtgcccggcccggacgacatcccccctcctcccaccaca
gctccaccagagcctccgttctcctccgctccgccactaggttggagagcaaagtcatcc
cagcagcccgtctcagtgtcccagtccacctcaacgcccgcccactaccagccgtactcc
caggcagcgcatttcacccatggcggcagggaaaggtcaggcagttccggcacgggcccc
ggtggtggagcggtggaccacgcgaccccttatgcacacgccactgcccacactgctcaa
agcagaactgcctcgcgaaaggtcgcctattcgggggagcctggtggagctggcccgggg
gccggtggagggncgaagacagccggtcttcggagaggctacagcaacgccatcctccca
tccagcagtgccactgtaatgccccagcaacaacagaccacaccgagtcaaccccaacgc
acagaccgcagtgcagctgggcctggagctggcggtcccaaaggaggggccaggagaggc
aagggaccactggtgaagcagtctaaggtggaggacctacgcatggcccagggtacgctc
ggggggaaaggctcggtggagaaaagctccatccccatccccaccattattgtcaaggcc
ccctcgaccagcagcagtggacgcagcagccagggtagcagtgtggaggccgacgctcct
gcatcaggagagacggatgaggcgaagacaccacacggtcctcctccctccacccccgct
ccacagccgcccgctccgccttccatccctgcgccgccgcctccctacttgccttctatg
cgagcccaggataatctggacttcacaagccagttcggggcagctatcgtcggtgctgct
cgccgggacagggaacggttgcacgaagctcgcagaaagagcgcctccttgtttatgtcc
gccgaggaggatgtaagcgtcggggtaagtgacggaataacaaggactcaagcgtcacag
caacagctcagcacacaggctgaaagttcatcaacacggctgcgcccgtccaagtccatc
gacgagggcatgttctccggggacacttttatccatcacacccgcagtatgcctcccgcc
tttggcctccctgagtactcctcgcctgccctggactatcagcctaagtctgtgcccact
gacttgtacacagcggcaggcaggcagccggcgtcctccggtacaaccaccttcattcac
ccgctaacagggaaggcccttgaccccacatcgccactcggcctcgccctggctgctagg
gagcgcgctctgagagacgacagcaggttaaggaggggagcagaacaccacttcagccgc
cagatgtcgagcgcggcgtttccttcgtccactgtcaactctcagccggtgtcgtcgacc
gcccagtcctccagctcctcttacctggtcacctcgtcctctctggccgctactacggcc
tccgttggtcgcccaccatcgccccgaatcctcagaggagtcggcagcgtgtggagtgag
gagggcgggggcggagacagggagcgcgaaggaggaggggctcgcgaggggcttagagtt
cgcttctccgaggacaaaaccgtccacacgcaccactaccagtctcaaccgtatcagtcg
acgtacaaggagagggagcgggagaggtcgagagagcgggacagatcgagggagcgggag
gcgtcgcgggaaagagagagggacaaagagagagaggattacatgaggagggcggagcaa
gctgccgaaagctctgttcaacatgcgtcccaaactcatcagcctgcaagaccctctttt
ctcaggatggaaaatcaagcggatgcctacatcttgtccctcacccctccctcacctcca
ccaaatggttctcagcagacagcgaacaccactgggagcagtgggactggtctgatggtc
cttcctccccccgccccctcgattgatgccgatgatgagtttgtctacgcagaccctctc
ccgcctccattacagtttgccaacagttttgacaggggaacggggggattatcagggtac
tcacaacacgggatgcgcccaaatagcttgacctcccgccaacagcaggtccctccacct
cctcctccaccaccccctcctccaccccccattaaagaagcaggtgggtttcatgctcac
acacccttgccctctcctcaggcaggagactccaccgcctccagcctcacatcttacgac
agtgaggttgctaaccttacccaatccgctccctctccctcccaaacgtcgcccaacccc
ccgccccctcactcgccctctaccctgcaccccacctcgtcaacgggacctccgcctccc
ccgtcggtctccccgccacctccgcccgggtcctatcacaggcccttctccgtgtcccac
cacctttacaacagctcacatacccccgggcgctcttcgccaacgcctcccccacacaca
gtcgcacctcccccgggataccgcggtaccccggcacccacctcgaccgctgccacctcc
gctccacacaggggcactttctcgcatgccatgaccgctagctgtgccgctacaaccaca
acatgcacctccactcagctctaccaagagcgcacacacacgggacaccaaacacacacc
acgtcctccaccgccaccacaggaggtcgcaggacaggggagcaccacccgtccctcacc
ctgctgccaagaaagggagagtcccaggagacagtggtggactctgggatcgaagagctg
gacagccgcagcagcagcgaccaccacctggacagcatcctggccagtgtccggggagac
aggctggaccggggggagaggggaggacggacggggggaggaggcgggacgggggaattg
gaaaggggaggggattttctggagtcttacatgagctacctggacggacaaaccttcgag
atgcagaatgccacagcagcagtgtccacctacccaaaggctaacaggttcagggagggc
ggtcgaaccagcgatctccacagacagaccagcaccgctcccgcatctttccactcccac
agacgaagggacgagcaggaagacgacgaggagggagcggatgaaagcagtcgcgacggg
tacggggggagtgacatgcagaatttgggacgtccgatttcaccgtactttgatcgccct
cgcacccccgagatcaagcctctctggggcgaggggcaaatggcggctgaccagtccgcg
gcaattttagaggggaaaaaggtttacccgcccgcctccagtatgaagcccagcatcata
aatgagctgaacagcaaactgcagcaaaggaccaaggacagctggcacagccagagccct
ctgggcagacacagagccagaaacagattctcagaggattcggcctcagctctgagtcct
ccttcagctcgatcccagtcaccgtctccgatttcgttatcgcagccgtcgttatccccg
tcccccacccctgcctcccagtaccccaactggggacgatcgccatcccctcaaccccca
gctgcgtctcagcctcctcgttctcattccccgatttccccaacgtcttatgccccttat
cccacttctccgaaacacagacctgtctaccgaaccaaagccctagaattccagttcatc
cccagtcgcgagtcccgcaaagcggaatcacacatgttccagcgtaggagagcacccagt
cccctcatctctccgtcagagcggcccaagctgggtccaccgcgaccatcgtcccttcca
ctcctccccaccacaccgctctacagtgcgatgtatgacctgcggggttcaatcacgccg
ccgtccccggggaaccctcttggagatccttacttttcgccctctcctcccctgttcgcc
gcctctggcgccccgccccctcccaactcggccttagttgtctctcgatccctttctccg
actcacttcttgtccggggcctcgtctccgccgatgcaccctcacactccgcctacatgc
ctgagttacccccacctaccgccaccttcccccacgaagccttttgcttccaagccactg
ccctactggaccaagtacgacgtcgcagactggctaggatacctgaacctgggggagcac
agggagcgtttcctggacaacgagattgacggcacccatctgccctccctcaccaaggac
gactttctggatctgggcgtgactcgcgttggccaccgaatgaacatagaacgggccctg
cggaccgtattggacaggctggccagtagcccatttcccattttggttctgtcccctcgg
gaagggccgactgagcggaggagggatgacgggagtcgtagctga
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integrated database retrieval system
