Gasterosteus aculeatus (three-spined stickleback): 120827820
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Entry
120827820 CDS
T07457
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03420
Nucleotide excision repair
gat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120827820 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
120827820 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gat03051
]
120827820 (rad23aa)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120827820 (rad23aa)
Proteasome [BR:
gat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120827820 (rad23aa)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120827820 (rad23aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
120827820
NCBI-ProteinID:
XP_040046867
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Position
XI:complement(2981394..2986000)
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AA seq
368 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIETERGKDNFPVSGQKLIYAGKILQDDTPIK
DYNIDEKNFVVVMVSKAKPTAAAAAAAATSPPASEAPKPSVQDSGSTSTAVPATTSAPVA
APAAVPIPPEEAKEEPSADATEPQPASSSAAGQGLDASSALVTGAEYESMLTEIMSMGYE
RERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPLSGPPEAPPLAEGENPLAF
LRTQPQFLHMRQAIQQNPTLLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGEA
PEVGELGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFL
LNQGLEDD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaacgctgcaacagcagaccatccagatcgagatagaccccgag
caaacggtgaaggccttaaaagagaagatagaaacggaaagaggaaaagacaactttccc
gtatctgggcagaagctgatatatgccggaaagatcctgcaagatgacacgcccattaaa
gactacaacattgatgagaagaactttgtggtggtgatggtttccaaggctaagcccacc
gccgcagctgccgctgccgctgccacctcgcccccggcctcggaagcccccaaaccctct
gtgcaggactctggctccacgtcgacagctgtcccggctacaacctcggccccagtcgct
gccccggcagctgtccccattccccccgaggaggccaaagaggagccaagcgccgacgcc
acggagccgcagccggccagctccagcgccgccggtcagggtttggatgcttcctcagcg
ctcgtgaccggagccgagtacgagtccatgctcaccgagatcatgtcgatgggctacgaa
agggagcgagtggtggcggcgctacgggccagtttcaacaacccgcacagagccgtggag
tacctgctcacgggtatccccagcagcccggtccaggagagcaaccccccggcccaggcc
cccctgtctggaccccctgaagccccgcctctagccgaaggagagaacccacttgcgttc
ctgcggacccagccgcagtttctgcacatgagacaggccatccagcagaaccccaccctg
ctgccagctctgctccagcaactaggccgggagaaccctcagctgctacagcaaatcagt
cagcatcaggagttgttcatccagatgctgaacgagccagtgggagaggggggagaggcg
ccagaagttggagagttgggggcagcgggggaggagggcgcgcctgtcaactacatccag
gttacacctcaggagaaggaagccatcgaaaggttaaaagcgctgggtttccccgaggcg
ctggtgatccaggcctactttgcctgcgagaagaacgagaacctggcagccaacttcctc
ctcaaccagggcctggaggacgactga
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