Gasterosteus aculeatus (three-spined stickleback): 120827842
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Entry
120827842 CDS
T07457
Symbol
samd9l
Name
(RefSeq) LOW QUALITY PROTEIN: sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120827842 (samd9l)
Membrane trafficking [BR:
gat04131
]
Endosome - Lysosome transport
Others
Others
120827842 (samd9l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
TPR_19
nSTAND_NTPase7
SAM_KIDINS220
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120827842
NCBI-ProteinID:
XP_040046902
LinkDB
All DBs
Position
XI:11481295..11489976
Genome browser
AA seq
1540 aa
AA seq
DB search
MADGHEQPPEGWTESQVSDWLKLIGVKKQYIEKLYEEEVDGKILLALDENFLKSKIGMKF
GPAHLIIQKRDELINSKEKSPVKKKATSGGKKELEQKNIDNKSVQSEGPLAQLPEKAQAV
VTNRPAGKEQHVSPAKEDCRPRPFDQEGIDFIYVKHRVLQPESGAFNLISPCHEFKSLAT
ATKLDRTRLQAKFAGEVLKFATGCMNIRSNGTIHFGVMDSKDDVGYVHGEIIGIPVQEKD
IYVDALDYIERSFSSGRDHVRECVRPPRFIEVVDRESTEKMYVVEVDIVPSISIVKNKVY
RVCLPKFAEATNKVHFEKETILRRVGSKTEPVMEKDISDFHERMKDRDAQREEAENNLFL
SAPDCCQDLGRKLKMLMTSGKKFIEKGKWFILVTNKFNPDDLCNIEWLLNLNIFCVFDFD
PDSKVSGLCSEYLQHHIANMHSLQSYRISGDMSIKEFTSNLHLFEQTSWIFCNGRSDFKV
DETTCDEMTWIKTKMTVLRESVSLICKQILPKGIFQVVFLLTSPVDKPLLHTFYEFFTDM
EGHEDIICICESEKNFQKWQSFAEGSCGAESVNNASVVGMKMSHINSTLQQVQSVEASAK
KHLPVFVKGTCLLETTEEEKMYSLEILTVDLCDGTTKEFIEEEKANIDQQFYHGGRINWL
NLWLSDRKHVEEIIERDAYQEVYTFVNDALKSNANQTPVNCINIYHHPGSGGSTVARQVL
WNNRKSVRCAVVKPSYPAALVAHHAVELREYEEKDQQKCLPVLLLIEDSDKEYLDDLKNE
LEVATNTKRIQHATLCFILLSCRRSHDPEKRCKESPLQNVSVTHKLSAQEKRKFARKREV
LEAQYEPDFILTFVLMSKGFDEKYVQQFVEHLLQGINRQDVVTTLILYVALLNTYVQNSF
ISQSHCEALLGLTVRWEMFRQHEFEESLGDRGKLVFLHLRDEKTHIESIRIIHPLIAEEI
LKQHLGNQQTRSSLAMDLLRDDVHLRERFGREEYHSFLKALFIRRARISKGDTYDSFFSP
LVEHVNEKEKSPEKAIDLLKEAFERFNKDSFFAQQLARLHYTYEKFEEAKYWAETAAKKQ
PNNSYILDTKGQVYKKWFQAKCKAIENDNVPKTAQNIADAVETALKALDCFQECEKAADA
DMDNSNSSGYFSEVEVGCSLLKLISSSQVFSNRTNGHSECMKYLLTEYIPEEVEDAWEPF
HGRLKKLNKTMHDALEWISEDLSYFQTDIGLDGEDPPDSSEEKISNPLKWLAKRSSEYGK
YFSETYFTALQGESAAANLTPFQKRMIIFKLGGGNITSILFKLTDQSNSVRLLETILSLY
PSNPKKAKFGQRDIINYIMAHLTLKCLSPQIQKVPPLKDLQALCFQFPTDKRKCLPSALF
LFTLLFWPEDHDTNDEKENKYEIVHSAVEHLEKGYWTKKKDVPQRKRRIYTHFFLGNGNG
LDKFVHKRKFETVTRGFSVSEKRMKWFRGEAWKKPEIANMLKCVSGWTEDGVVYLEGPRK
KRFNIQPLHVPSVPHSNENITFYLGFTFRGPVACNIVVKL
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggacatgagcagccacctgagggttggactgaatctcaagtaagcgactgg
ctaaaattaattggagtgaagaagcagtacatagaaaagctatatgaggaagaggtggac
ggaaagatccttcttgcactagatgagaactttttaaagtcaaagattggcatgaaattt
gggcctgctcatttaattattcaaaagagagacgagctcatcaactccaaggaaaagtct
ccagtgaagaaaaaggccactagtggtggaaaaaaggaattggaacagaaaaacattgat
aacaaatctgttcaaagtgaaggtcctctggcacagctcccagagaaagctcaagctgtc
gttacgaatcgaccagcaggtaaggaacaacatgtgtcccctgcaaaagaagactgcaga
ccacgaccgtttgatcaagaagggattgatttcatatacgtaaagcacagagtcctgcaa
ccggaatcgggtgcttttaatctgatatctccatgccatgaatttaaatctttagccaca
gctactaaattggatcgtacaagacttcaggctaagtttgccggagaggtccttaaattt
gcaactggctgtatgaatatcagatcaaatggcacaatacactttggtgtgatggacagc
aaggacgacgtaggatatgtgcatggtgagataattggtatccctgttcaagagaaagac
atttatgtcgacgctttggactacatcgaaaggagtttctcttctggcagggaccacgta
cgtgagtgtgtacggccaccaaggtttattgaggttgtggatcgagaaagtacagaaaag
atgtacgtggtagaggttgacattgtgccttccataagtattgttaagaacaaagtgtat
agagtttgtctgccaaaattcgcagaggcaaccaataaagtacattttgagaaagaaacg
attctgcggagggtgggttcaaagaccgaaccggtgatggagaaagacatcagtgacttt
cacgaacgtatgaaagatcgagatgctcaaagagaagaagcagaaaataatctgttcctc
agtgccccagactgctgccaagacctcggaagaaaactcaaaatgctaatgacatctggg
aagaaattcatcgaaaaagggaaatggttcatactcgtcacaaacaaattcaacccggat
gacctttgcaacattgaatggctgctgaacttgaacatattctgtgtgtttgactttgac
ccagactcaaaggtttcaggtctttgcagtgagtaccttcagcatcacattgcaaacatg
cattctctgcagagctacaggatatccggtgacatgagcatcaaagaattcacaagcaac
ttgcatctgtttgagcaaactagctggatcttttgtaatggccgaagtgacttcaaagta
gatgaaactacgtgcgatgaaatgacttggatcaagacaaaaatgactgtcctgagggaa
tctgtgtctttgatctgtaaacaaatcttgccaaaagggatattccaggttgtttttctt
ctcacatcaccggttgacaaacccctcttgcacaccttttatgagtttttcacagacatg
gaaggccacgaagacatcatctgcatctgcgagtcagagaaaaacttccagaagtggcaa
agctttgcagagggctcatgtggagcagaaagtgtgaacaatgccagtgttgttgggatg
aaaatgagtcacattaattcaactctacagcaagtacaatccgtggaagcatccgccaaa
aaacacttgccagtgtttgtgaaagggacatgtcttcttgaaacaaccgaagaggaaaag
atgtattctctggagattctgacagttgatctttgtgatggaacaaccaaagaatttatt
gaagaagagaaagcaaacattgaccagcagttctaccatggcggtcgaataaattggttg
aatttgtggctttctgatcgcaagcatgttgaagagatcatcgaaagagatgcttatcag
gaagtttacacttttgtcaatgatgctttgaagtcgaatgccaatcaaactccggtgaac
tgtataaacatctaccatcatccaggaagtggaggcagcactgtcgcaagacaggtgctg
tggaacaacaggaaaagtgtaaggtgtgcagttgtgaagccttcatacccagccgctctt
gttgcacatcatgcagttgaactgagagaatatgaagaaaaagatcaacagaagtgtctc
cctgtgctgctcctcattgaggactcggacaaggaatacctagatgatctcaagaatgaa
ctggaggttgccaccaacaccaagagaatccagcatgcaactctgtgtttcattttgttg
agctgcagacgctcccatgatccggagaaaagatgcaaggagtctccactgcagaatgtg
tccgtcactcacaagctgtctgctcaagagaagcgcaagttcgctagaaaacgagaggtg
cttgaggcacaatacgaacctgacttcatcctgacatttgttttgatgagcaaaggattc
gatgaaaagtatgttcaacagtttgtggaacatttgctgcaaggcatcaaccgccaagat
gttgtcactaccctcattctctatgtagcactgctgaacacttacgttcaaaactcgttc
atctctcagtcccattgtgaagctttgcttggcttgaccgttcgctgggaaatgtttcgc
caacatgagtttgaggaatcacttggtgaccggggtaaactagtcttcttgcacctcagg
gatgaaaagacgcacattgaatcaatcagaatcatccatccactcatagcagaggaaatt
ctaaagcaacatttgggaaaccaacagacccgaagcagtttagcaatggatttgctccgt
gacgacgtgcaccttagagagcgttttggaagggaggaatatcattcatttttgaaagcc
cttttcataaggcgagccagaataagcaaaggggacacgtatgatagtttcttctctcct
ctggttgagcatgtgaatgaaaaagaaaaaagcccagaaaaagcaattgacttgctcaag
gaagcgttcgagcgcttcaataaagactcattctttgcacaacaacttgctcgtcttcat
tacacttatgaaaagtttgaagaggcaaaatactgggcggagacagcagccaaaaagcag
cccaacaactcctacatacttgacacaaaagggcaagtgtacaagaaatggttccaagct
aagtgcaaagccattgagaatgacaatgtaccaaagacagcccagaatatcgcagatgct
gtggagacggcactgaaagccctggattgttttcaagaatgtgagaaagcagctgacgca
gatatggacaacagtaatagctcagggtatttctctgaggttgaggttggatgcagcctg
ctcaaactgatctcttcatcgcaagtgttttcaaaccgaaccaatggccactcagagtgt
atgaagtacctgttaacagagtacatacctgaggaggttgaagacgcctgggaaccattc
catggccgtttgaaaaaactaaacaagaccatgcatgatgcccttgaatggatttcagaa
gacctcagttacttccagacagacattggtttggatggagaagatccgcctgacagttct
gaggagaaaataagcaatccactcaaatggttggcaaagagatcttcagagtatgggaaa
tatttcagtgaaacttattttactgcgcttcaaggggaatccgctgcagccaatctgact
ccttttcaaaagcgcatgatcatctttaaacttggaggggggaacataacatccatcctc
ttcaagctaactgatcagagtaattcagtgcgtcttctcgagaccatcctgtctctctac
cccagtaatccaaaaaaggctaaatttggacaaagggatattatcaattacataatggcc
caccttactctgaagtgcctgtctccacagattcagaaggttcctcctctgaaagatctg
caagcactgtgttttcagttcccaaccgataaaaggaaatgcttaccaagtgccctgttc
ttgttcactttgctattctggccagaggatcatgacaccaatgatgagaaagaaaacaaa
tatgaaattgtccactctgctgttgaacacctggaaaaaggctattggaccaagaagaaa
gatgttcctcagaggaagagaaggatttacacccatttctttctgggcaatggaaacgga
ctcgataaatttgtccacaagagaaagtttgaaacagtcacaagggggttctcagtgtct
gagaaacgcatgaagtggtttagaggggaggcatggaaaaagcctgagattgcaaacatg
ctgaaatgtgtgtctggatggactgaagatggagtggtgtaccttgaaggccctcggaaa
aagaggtttaatatccaacctcttcatgtaccatcagttcctcatagtaatgaaaacatc
acgttctacctggggttcacattcagaggacctgttgcctgcaacattgttgtgaaattg
tag
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integrated database retrieval system
