Gasterosteus aculeatus (three-spined stickleback): 120827975
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Entry
120827975 CDS
T07457
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120827975 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120827975 (gga3b)
Membrane trafficking [BR:
gat04131
]
Endosome - Golgi transport
Others
GGA
120827975 (gga3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
VCIP135_N
DASH_Dad4
DUF8799
DUF2096_N
UBA_N4BP2
Motif
Other DBs
NCBI-GeneID:
120827975
NCBI-ProteinID:
XP_040047158
LinkDB
All DBs
Position
11:12120081..12125959
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AA seq
710 aa
AA seq
DB search
MAYQEGESLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQIAVPLLVHKIHSPQEW
EALQALTVLEACMKNCGRRFHNEVGKYRFLNELIKVVSPKYMGDSAPEKVKMKIVEMLYS
WTVAFPNEIKISEAYQTLRRQGLVTHDPELPLDRTLIPSPPTRPKHPVFDNEDMGKLLAE
LLRSKNPEDLQEANRLIKNMVKEDEARVHKVTKRIHTLEEVNINVKLLTEMLSHYDKDRS
TDSDRDIIKDLYERCDKLRRAAFKMATETEDNDTSLGDILQASDDLSRVINAYKKIVEGQ
PLNGDSEEPRPSAGRSESETTDTLIDLAGLDTPSPPQPAAPPFQSLNPVSADLSASPIPV
LPPPPKRLAGSDGSQSSSPIRPPLDKASTTLSLLDDELLCLGLNDPPASLSGQSKPRLNE
FTNHWTSLQAAGVDMFGSVARSGPAVPPVVPPAVRPAVPAAEPAAATHSLQDLQDLAMMG
FSDHKSSSIQKAARGSGFGLPAAAPPLVHGHGSPSSPSFLRGAFPGSPALSHAKAQSLGS
APGSPLFRSLSPCDLPLQGSPARATDSLSNVHVPLEAIRPSKVLPVTAYDKDGVRMLLNF
ASDCPPGRPDVLVLVVSMLNTAPLLVHNVVLQAAVPKSMKVKLLPPSGTEVAPFNPILPP
ASITQIMLLANPTKEKVRLRYKLAFTLGDRLCNEVGEVDQFPPPELWGHL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggaaggggagtcgcttgaatcctggctcaataaagccacccatccgact
aacaggcaggaggactgggagtacatcataggcttctgtgatcagatcaacaaggagttg
gaaggtcctcagatagctgtgcctctcctcgtccacaaaatacactcgccacaagaatgg
gaagctcttcaggctctgaccgtattggaggcatgtatgaagaactgcgggagaaggttt
cacaatgaagtcggaaaataccgatttttaaacgagctgattaaagttgtgtcgccaaag
tacatgggcgacagtgcacccgagaaggtgaagatgaagattgttgagatgctgtacagc
tggacggtggctttcccaaacgaaatcaagatcagcgaagcctaccagacgctgagaaga
cagggcctcgtcacacacgaccccgagttgccgctggacaggactctgatcccctctcct
ccgactcggcccaaacatccggtgtttgacaacgaggacatgggcaagctgcttgctgag
cttctccggagtaaaaatccagaagacctccaggaagccaacagactaatcaagaacatg
gtgaaagaggacgaggcccgagtgcacaaggtcaccaagcgtattcacacgctggaggag
gtgaacatcaacgtgaagctgctgacggagatgctgtcccactacgacaaagaccgctcc
accgactcggacagggacatcatcaaggatctctatgagcgatgcgacaagctgaggcgt
gctgctttcaaaatggccaccgagacggaggacaacgacaccagtttaggggacatcctg
caggccagcgacgacctctccagggtcatcaacgcctacaagaagatcgtagaggggcag
cccctcaacggggacagcgaggagccccgaccctcggccggtcgcagtgagagcgagacc
acggacacgctgatcgacctcgcaggcctggacactccgagtccccctcagcccgccgcc
cctcccttccagtccctgaatcccgtctccgccgatctctctgcgtcccccatccccgtc
ctgcctcctccgcccaaacgcctggccggctccgacggcagccagagcagcagcccgatt
cgccctcccctggacaaggcctccactacattgtccctcctcgacgatgagctgctgtgt
ctgggactcaacgacccccccgcctctctgagcggccaatcaaaacccaggctgaatgag
ttcaccaatcactggacttccttgcaggctgcaggcgtggacatgtttggcagtgtcgct
cgttcaggtccagctgtgcctccagttgtgcctccagctgttcgcccagctgtgcctgca
gcggaaccagctgctgccacccacagtctccaggacctgcaggacctggccatgatgggc
ttttctgatcacaagagctcgtccatccagaaggcggcccgaggaagcggcttcgggttg
cctgcggcagcccctcccctcgtgcacggccacggctctccctcctccccctccttcctc
cgcggggcgtttcccggctccccggctctgtcccacgccaaggcgcagagcctgggctcc
gccccgggcagcccgctcttccgctcgctgtccccctgcgacctccccctccagggcagc
ccggccagggccacggactccctgagcaacgtgcacgtccccctggaggccatcagaccg
agtaaagtgttgcccgtgacggcctacgacaaggacggcgttcgcatgctcctcaacttc
gcctcggactgcccccccggcaggcccgacgtgttggtgctggtggtgtccatgctcaac
acggcgccgctgcttgttcacaacgtggtcctgcaagccgcagtgccaaagtcaatgaag
gtgaagctgctgcctccatcgggtacagaagtggctccgttcaaccccatcctacctccc
gcctccatcacccagatcatgttgctggccaacccaacaaaggagaaggtgcgtctgcgc
tataagctggctttcacactaggagatcgtctgtgcaacgaggtcggagaggtcgaccag
ttccccccgccagagctatggggtcatctatag
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