Gasterosteus aculeatus (three-spined stickleback): 120827976
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Entry
120827976 CDS
T07457
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120827976 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120827976 (nup85)
03036 Chromosome and associated proteins [BR:
gat03036
]
120827976 (nup85)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120827976 (nup85)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120827976 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
120827976
NCBI-ProteinID:
XP_040047159
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All DBs
Position
XI:complement(12125968..12131265)
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AA seq
652 aa
AA seq
DB search
MEEVDVEPTVTNIPAASDGKHLGFAWGPGDILVYETLYKGSDAKGSGCSFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIREDLPSKNKKNQFVSISKNYRSVIRACMEELQQVAVST
KEAAVATQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKARE
VLQSESPAEHRDYWDVVVSYVLQGRLEEARQMLVKQAALQPAARSMYKLIDTLLSRMPFY
NPGGNQTLTEFDVKWRHWHDEVNRCLQDNSFASNRHLEIICKILAGDEDTLLEHKELLST
WYHFLVTRLLFSHPTVKPTELHYYAQSCLTMFLDSRSVPEPLDNILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDHCPEFGHVYLELQIERVPLDTERKALKVLRICDQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISERFLQDYCTRGTFSDLDLIDNLGPAMLLSDRLTFLGKYRE
FHKLYGEKRFGEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMFC
LEELTSCLNASALGSPKTSQDEDIELTKVELLRLSLARNLAMAIIKEGTVEA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtggagccgacagtcacaaatattcctgcagccagtgatgggaag
catttgggatttgcatggggtccgggggacatccttgtgtacgagactctctacaaaggg
tcagacgctaaaggatcaggctgttccttcatccacgaagtcaggaaagatgaggatata
tattcccccattttacgcaaactcttcaatgagtctcatcacatctttgttggcctgcag
acaattagagaggacctccccagcaagaacaaaaaaaaccaatttgtcagcatcagtaaa
aattacagatctgtgatacgagcctgtatggaggagcttcagcaagttgcagtttctacg
aaagaagcagcagtagccacgcaatatggaaaccaggtttccattctgttggccatagaa
ctgatctggaatctgtgtgaagtgctcttcattgatgctgcacccgcgggttccctgttg
ctccacctcctagactgggtaaggttacacaaggctgatgtggatgagaaggccagagag
gtgctgcagagtgagagccctgctgagcaccgcgactactgggatgtggtggtgagttat
gtgctgcagggcaggttggaggaagccaggcagatgctggtgaagcaggccgccctgcag
cctgctgccaggagcatgtacaagctgattgacactttgctcagcaggatgcccttctac
aatcctggtggcaatcagacgctgacagagtttgacgtgaagtggagacactggcatgac
gaggtgaaccgctgcctgcaggacaactcgtttgccagcaatcgacacctggagatcatc
tgcaagatcctagcgggggacgaagacacgttgctggagcacaaggagctgctgagcacc
tggtaccacttcctggtcactaggctgctcttcagccaccccacagtcaaacccaccgag
ttacattactatgcacagtcatgcctgaccatgtttctggactcgaggagcgttccagag
cctttggacaacattttactggctgcttttgagtttgacattcatcaggtcatcaaagac
tgcagcattgctctcaacaactggtggtttgtggcccatttgacggatctgttggatcac
tgcaaactcctccagtctcacaatctgcactttggctccaatttgagagagttcctcctg
ttagaatacgcttctggtctctttactcatcacagtctgtggcagttggcagtggattac
tttgaccactgcccagagtttggccacgtctacctggagctgcagatcgagcgggttcct
ttagacaccgagcgcaaagccctcaaggtgctcaggatctgtgaccagaggcagatgtcc
gagcaagtgcgcagcatctgcaagatcatggctatgcgcgccctgcggaataacagactg
ggctctgctctctcctggagcatcagggccaaagacgctgcctttgccacgctcatttca
gagaggtttctacaggattactgcaccagaggaaccttctccgatttggacctgatcgac
aacttgggtccagcaatgctgctcagcgacaggctcactttcctcgggaagtaccgggag
ttccacaagctgtacggggagaagcgcttcggcgaggcggccaagctgctcctctcgctc
atgacggccaagatcgccccccgcagcttctggatgacgctgctgaccgacgccctgccg
ctgctggagcagaaagaggtgatcttctcggcagaccaaacccacgagctgatgttctgt
ttagaggagctcacctcctgcctgaacgcctcagcgctcggctcaccgaagacctcgcag
gatgaagacattgagctgaccaaagtggagctcctgagactctctctggcccggaatctg
gccatggcgattattaaggaaggaaccgtggaagcgtga
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