Gasterosteus aculeatus (three-spined stickleback): 120828026
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Entry
120828026 CDS
T07457
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120828026 (hnf1ba)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120828026 (hnf1ba)
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120828026
NCBI-ProteinID:
XP_040047249
UniProt:
A0AAQ4RTR2
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Position
I:12588051..12603224
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AA seq
571 aa
AA seq
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MFLKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLESLPMSPARPQS
GKMNGVDVDSKPVFHTLTNGHSKGKMSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVDRMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGSMSNMTDKGNQDPVFFFPEFNPSGQGMGQPGEEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITVPSHGMNTLLSHNSPHHPQTSLSPPMRY
SQGPGEVTSSTTISHHGGNAMATSQSVLQQVSPGGLDHSHSLLSPDSKMISGSGGGLPPV
STLTNIHNSHHSHQQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFSQQ
LHSPHHQSLMQQSPGQMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFSSAMVVTDGNSLS
TLSSMSSNKTDGAVNKMVQLGGLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaaatggtatccaagctgacatctctgcagcaggagctcctcagcgccctg
ctggactcgggagttaccaaggatgttctgatccaggccctggacgacatggaccccagt
ccgcctggctttggagtaaaactggagagcctgcccatgtcccccgcgcgtccccagagc
ggcaagatgaacggggtggacgtggattccaaacccgtcttccacacgctcaccaacggc
cacagcaagggcaagatgtccggggacgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctgaacacggaggaggccgccgagcagcgcgcg
gaggtggatcgcatgttggcagaggatccgtggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaaagggaggtggtggacgtcacagggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacgcagaagcgagccgccctt
tacacctggtacgtcaggaaacagcgggaaattctccgacagttcaaccaggcagtgcaa
ggctctatgagcaacatgacagacaaaggcaatcaggatccggtgttttttttccccgag
ttcaacccgtctggtcagggcatgggtcagccaggcgaagaggtaggcagtgaaccgtcc
tgcaagaaaatgagacgtaaccgcttcaaatgggggccggcatcccagcaaatcctgtac
caggcctatgaacgccagaagaaccccagcaaggaggagagggaagctttggtagaagag
tgcaacagagccgaatgtcttcagagaggcgtctccccctccaaagctcagggcctcggc
tctaatctggtcactgaagtgcgagtctacaactggttcgccaacaggcgcaaagaggaa
gccttcaggcagaagttggccatggacgccatcaccgtaccgtcccacggcatgaacact
ctgctgtcccacaactcgccgcatcacccccagaccagcctttcacctcccatgcgttac
agccaaggccccggtgaggtcacctcctccaccaccatcagccaccacggtggaaacgcc
atggcgaccagccagtcggtgctccagcaggtgtctccgggtggattggaccacagccac
agcctgctgtcacctgactccaagatgatttcaggttcgggtggaggtcttcctccagtc
agcacgctgaccaacatccacaattctcatcacagccaccagcagaacctcatcatgcct
ctatccggggtcatggccatagcacagagtttgaacacgtcgcaatctcagacggtgcca
gtgatcaacagcgtggcgggcagcttagcggcgctgcagccggtgcagttttcccagcag
ctccacagcccccaccatcagagcctgatgcagcagtcccccggccaaatgagtcagcag
ccgttcatggctactgtcacacactcgcacatgtatcctcacaagcaggagcctccgcaa
tattcccacccgtcgcgtttctcctcggccatggtcgtcacagacggcaacagcctcagc
accctcagctccatgtcctccaacaagacggacggtgcagtaaacaagatggtacaactc
gggggtctctcctggtgtcctcttcaagcttggtga
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