Gasterosteus aculeatus (three-spined stickleback): 120828051
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Entry
120828051 CDS
T07457
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120828051 (tsen54)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120828051 (tsen54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
IntS14_b-barrel
Motif
Other DBs
NCBI-GeneID:
120828051
NCBI-ProteinID:
XP_040047301
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All DBs
Position
XI:complement(17169621..17174414)
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AA seq
481 aa
AA seq
DB search
MADLNKEDTESTQYNEILTPTELFAARSRSHKIPVRGQKDFFPDDSEEQRQRLEQSLTEH
WSLVSEERVEKLGNLVKATWIPSEGIVELQSPAGKFWQTMGFSACGKQLLLPEEALYLME
CGNLQVFHLELPLSVQDGYERFLSPSTVSLLQYQVFGHLKRLGFVVHRFDSSCQPSSYER
QLNLPRSRDRAGTRLKRKRSDSSEASDRKDEDRTPPETSGVRPAVEGSEGRGGTWWLTDV
HGGQSDPSPASGSSHWDFSSILFPDVGSRERQPGRLPSPDPSLLPASLAVGVCDVAPWRR
RINLREVKTSPKEQKREEQRRGVNKDREVRRCRNWTEYRALLARRRGRRSGRPAHLWDGD
VTPLHDPGQAIPTGELLDKISVIKSTHLLEGASRLKDSGEWRICFNVYQPDSVADFRKSD
PGKPYSRVCVCSFGGPVPDLRALKTLALQSGDVSLVFAVVDHGDISFYTFKDFTLPTDVF
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctaaacaaggaggacaccgaatccacgcagtacaacgagatattaactccg
acagagctgtttgcagcccgatccaggagtcacaagatcccggtcagaggtcagaaggac
ttcttccccgatgactcggaggagcaaaggcagcggctggagcagagtctgacggagcac
tggagcctcgtgtcggaggagagggtggagaagctaggaaacctggtgaaggccacgtgg
atcccaagtgaggggatcgtggagcttcagtctccagccggcaagttttggcagacaatg
ggcttctccgcctgcggcaagcagctgctcctccccgaggaggctctttacctgatggag
tgtgggaacctgcaggtgttccacttggagctgccgctgtccgtgcaggacgggtacgag
aggttcctctcaccgagcacagtgagcctcctgcagtaccaggtgttcgggcatttgaag
aggctcggcttcgtggtccaccggttcgattccagttgccagccgtcgtcgtacgagcgg
cagctcaacctgccgcggtcacgtgaccgagcgggaacccgcctgaagaggaagcgcagc
gacagctctgaagcgtcggacagaaaggacgaggacagaactcctccggagacttccggc
gtccggcccgccgtcgagggttcagagggcagaggcgggacctggtggctgacggatgtt
catgggggccaatcggatccctcgccggcctctggctcctcccactgggacttcagctcc
atccttttccccgacgtgggctccagggagcgccagcccggccgcctgccgtccccggac
ccgtccctgctgcccgcgtctttggccgtgggcgtttgtgacgtcgccccctggaggcgg
aggatcaacctgagggaggtgaagacgtccccgaaggagcagaagagggaggagcagcgg
cggggagtcaacaaggacagggaggttcggcggtgcagaaactggacggagtatcgggcg
ctcctggcgaggaggcgggggaggcgttccggacgaccagcgcacctgtgggacggagac
gtcactcctttacacgacccgggacaagcgatccctacaggggagctgctggataaaatc
agtgtgatcaaatctacacatttactggagggagcgtccaggttgaaagactcgggcgag
tggaggatttgcttcaacgtttaccaacccgactcggtcgccgacttcaggaagagcgac
ccggggaaaccctactcacgcgtgtgcgtgtgcagctttggcggcccggtgcccgacctg
cgagccctgaagacgctggcgcttcagagcggagacgtctcgctggtcttcgccgtggtg
gaccacggagacatctccttctacaccttcaaagacttcacgctgcccaccgacgttttc
ccctga
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