KEGG   Gasterosteus aculeatus (three-spined stickleback): 120828074
Entry
120828074         CDS       T07457                                 
Symbol
ifnphi1
Name
(RefSeq) interferon phi 1
  KO
K05414  interferon alpha
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04060  Cytokine-cytokine receptor interaction
gat04217  Necroptosis
gat04620  Toll-like receptor signaling pathway
gat04621  NOD-like receptor signaling pathway
gat04622  RIG-I-like receptor signaling pathway
gat04623  Cytosolic DNA-sensing pathway
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    120828074 (ifnphi1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    120828074 (ifnphi1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120828074 (ifnphi1)
   04621 NOD-like receptor signaling pathway
    120828074 (ifnphi1)
   04622 RIG-I-like receptor signaling pathway
    120828074 (ifnphi1)
   04623 Cytosolic DNA-sensing pathway
    120828074 (ifnphi1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120828074 (ifnphi1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:gat04052]
    120828074 (ifnphi1)
Cytokines and neuropeptides [BR:gat04052]
 Cytokines
  Interferons
   120828074 (ifnphi1)
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 120828074
NCBI-ProteinID: XP_040047341
LinkDB
Position
XI:16832471..16834456
AA seq 193 aa
MTSWTSMLVLTLTLLCSAGTPGLCCDWLQHYGHLSNVSLTLVQTMGNQLTDEESPVSFPY
RLYERIMNDKEDNQLVFIRDSLELMAKLYRHDNRSSVTWDANKMERFLMIIHRQIHGLNL
CVSTQITRNTRLRRYYRRLEKKTLYSTGGSPASWELIRKESKLHLDQLNQLWGFMVESAS
ASRGRSKANRPQH
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaccagctggaccagcatgcttgtgttaaccctaaccctcctctgcagcgccgggacc
cctggactctgctgtgactggctccaacactatggacacctgagcaacgtgtctctgact
ctcgtccaaaccatgggcaatcagctgactgatgaggagagtccagtctccttcccgtac
cgactctacgaacgcataatgaacgataaggaagacaaccagttggttttcatcagagac
agtctggagttgatggctaagctctatcgccatgacaaccgctcctctgttacctgggat
gcaaacaagatggaacgcttcctgatgatcatccacagacaaatacacggactgaacctt
tgtgtgtcaactcaaatcacaagaaacacccgcctgaggaggtactaccgcagactggag
aagaaaactctgtacagcactgggggtagtcctgcatcctgggagctgataaggaaggag
agtaaactgcatctggatcagttgaaccagctgtggggcttcatggtggaatcagcttca
gccagcagggggcgatctaaagccaatcgaccgcaacactga

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