Gasterosteus aculeatus (three-spined stickleback): 120828102
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Entry
120828102 CDS
T07457
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120828102 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120828102 (gtf2f1)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120828102 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
120828102
NCBI-ProteinID:
XP_040047383
UniProt:
G3PGP2
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All DBs
Position
XI:12960609..12965014
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AA seq
533 aa
AA seq
DB search
MTSLGSSSSSSTEYTVRVPKNNSKKYNLMAFNSGDKVNCSAWTQARMERDMSARRIYGEE
ETAEGAAGSEFGKKQREESRRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWSRRNKVVNHFSIMLQR
RFREQERGGEDDDDENDKAGKNKKKGGKKGGDLRIHDLEEDLEMSSDDSDSSMGDDGEAK
TKGKKDTGKGKAKKKKKKKGSDKEALEDSDDGDYEGLEVDYMSDESSSDEEPEKGKQSKG
EDHPKGIDEASESEEESEEEKPNEEETKEEEEEEEGKKTPVQTEKKKKKDSSGESESSDD
SDIDGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSSTLRAAASKLEQG
KRPTAGPSTDSPAAKRLKMEPSSQSPAPSGKTTPQPPSGKSTPSSSDVQLTEEAVRRYLI
RKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNEKMHFYLTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactggggagcagcagttcctccagcacggaatacacagtgcgagtccccaaa
aacaacagcaagaagtacaacctcatggctttcaattcaggagacaaagtcaactgttca
gcctggacacaggctcgcatggagagagacatgagtgcccggcggatttatggggaggaa
gagacggcggaaggtgcggctggcagtgagtttggcaaaaagcagcgcgaggaatcacgg
cggaagaagtacggtattgtgactcgggagttcaaagtggaggaccagccctggattcta
aaagtcaatggcaaggctggcaagaggttcaaaggtataaaaaagggcggcgttacagaa
aatgcctcctactacatcttcacacagtgtcctgatggagctttcgaggcttttcccgtc
cacggctggtacaactttacaccgcaggccaaacaccgaactctcactgccgaggaggct
gaggaggagtggagcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgggagcaggagcgcggtggtgaggacgatgacgatgagaacgataaggcgggg
aagaacaaaaagaaggggggcaagaaagggggcgatctgcgcatccacgacctggaggaa
gacttggagatgagcagcgatgacagtgacagcagtatgggggacgatggagaagcgaag
acaaagggaaaaaaggacacggggaaaggaaaagcaaagaagaagaagaagaaaaagggc
agcgacaaagaggccctggaggacagcgatgacggtgactacgagggtctagaggtggat
tacatgtcggatgaaagcagttcagacgaagagccggaaaagggaaagcaaagcaaagga
gaggatcatccaaaagggatcgatgaggcatctgaaagtgaggaagagagtgaggaggag
aaaccgaacgaagaggaaacaaaggaggaggaggaagaagaggaaggaaagaaaacgccg
gtccaaacggaaaagaagaagaaaaaagacagcagcggcgagtcggaaagctccgatgac
agtgacattgacggagagacggcctccgctctgttcatgaagaagcgcactcctcctaaa
cgtggtggccgtggctctgcaggcagctccaggactggcagtcgccccgggacgccgtcc
atagactcggcctccacctccagtacgctccgcgctgccgccagcaagctagagcaaggt
aagagaccgactgctggtcccagcaccgactcaccggctgccaaaaggctcaaaatggag
cccagcagtcagagcccagccccctctgggaaaaccacgccccaacccccgtcaggcaaa
tccactcccagctccagtgatgtgcagctaacagaggaagcagttcgccggtacttgatc
cgtaaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggtttg
agcagcgagcagaccgtcaacgtgctggcacagatcctgaagcgccttaatccggagcgc
aagaatgtcaacgaaaaaatgcacttctacttaactgaataa
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