Gasterosteus aculeatus (three-spined stickleback): 120828117
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Entry
120828117 CDS
T07457
Symbol
srebf2
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120828117 (srebf2)
04131 Membrane trafficking [BR:
gat04131
]
120828117 (srebf2)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
120828117 (srebf2)
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120828117 (srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120828117
NCBI-ProteinID:
XP_040047410
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All DBs
Position
XI:complement(4850845..4864315)
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AA seq
1180 aa
AA seq
DB search
MDTGEYISTMDNMDPTLAELGDEFTLGDIDEMLQFVSNQAEDFPDLXEDQMAMASSAQSA
AAAAATPAPRPAVQTPPTPPTPKTPAAAVYQSSTVSLVSPRTLSPQSMPLTPPLTPGQAP
SPSAAPAVQQQVTRSPPLLQPRPQLVQPIQPQPQHTTQPAIQLHAQGIAMQTQSFPVHTL
VQTHCQTGMPIQTQAAQTVMIASNGGQSRFIQSPVICHQSPGSSFQVLQPQMQSIMTSPQ
LQPMTIQHQRVLTPTGQTIQTLSSPATVHTMQQQMQQVPVLVQQPQILKTDSLVLTTLKP
DGTQVLSTMQSPAGIANFTTPIQNTALQVPTLMSSNILTTVPMMMGGGDKMPIKQLQPGT
AHGAHMVRSNVDQGQMVGGVIGPGGVVKEGERRTTHNIIEKRYRSSINDKIVELRDLVMG
NDAKIHKSGVLKKAIDYIKYLQQVNHKLRQENLALKMGNQKNKTVILSEDMELKEEIVMM
SPPASDSGSPPQFSPYSVDSEPGSPLLDHEQMKIEPDSPPSVGVMDRSRLLLCALTFFCL
SLNPLPSLLGSDASGSPSLSGGHGPSRTLVWFPTHTQDFASWLRCLLPWVMVWVLSGVGA
VWGCVRVLYLWEPVTPLHSPKSVSFWRHRRQADLHLNRGDYTAAMGSLETCLSVLTRALP
STTLDLVCSLSWNLIRYALHRPTPLGWLVHQVGGKHEGEESKTSAKDAALVYHRLSQLQL
TGKLPQRNSLWALSVSLSAVNLSQSAQGKMAPAQLTQIYVTAATALRTVLGHHLSCLPGY
LLSCAESVASQSETRPIPDCLRWLFTPLGRQFFLSCDWSVKSESSDGVYTSQREPTDPIA
QLHRCFCRKLLERAVHTLIQPQSDSDAGKRNSDSGEFSNALEFLQLLNSCTEDSPSPPPP
FSTPPNHTTTPVGDPVSRWWALVLKATVHWLQGDDVAVRSLLVEAERMPRALHTLDHPLP
KAVLLLCKAVQMSLPPVKGEGALAYLSHCDRASGYLRSSISVPVAQTGNWLNKGVELLIC
DLLLTLRTSLWQRGGSSNGEPGPAPGSQLAGFQRDLSALRKLTQCYRQAQHKVFLHETTV
RLMAGASPTRTHQLLEHNLRRRTHNSYTAGESLLGERERAHAILLACRHLPMPLLTPPGH
RARLLAEAKRTLERVGDRRSLQDCQQILLRLSGGTTIAAS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggagagtacatctccaccatggacaacatggacccgactttagccgaactc
ggagacgaattcactctgggggacatcgacgagatgctgcagtttgtcagcaaccaggcg
gaggacttcccggacttgnttgaggaccagatggccatggcgagctccgcgcagagcgct
gccgccgccgccgccaccccagcgccgcgccctgccgtccagacacctccaactcctccg
acccccaaaacgccagccgccgctgtctaccagagctccacggtcagcctggtcagcccc
cgcacgctgtctccccagtcgatgcccctcacccctcccctcacccccggacaggctccc
tcgccctcggccgcccccgcggtgcagcagcaggtgacccgcagccccccgctcctccag
ccgcggcctcagctggtccagcccatccagccccagccccaacacacaacccagcccgcc
atccagttgcacgcccaggggatcgccatgcagacccagagcttcccggtccacaccctg
gttcagacccactgccagacggggatgcccatccagacccaagcggcccaaacggtgatg
attgcctccaacggcgggcagtcccgtttcatccagagcccggtcatctgccaccagagc
ccaggctctagtttccaagtcctccaaccacagatgcagagcattatgacgtcaccgcag
ctgcagccgatgaccattcagcaccagcgtgttctcaccccaaccggtcagaccatccag
acgctgtcctcgcccgccacagtccacactatgcagcagcagatgcagcaggttcctgtt
ctcgtccagcagcctcagatcctgaagactgattcactggttctcacaaccctgaaacca
gacggcacgcaggtgctgtctaccatgcagagccctgcaggcatcgccaacttcaccacg
cccatccagaacacagctctgcaagttccgactttgatgagcagcaacatcctcaccacc
gtccccatgatgatgggaggaggagacaagatgccgatcaagcagctgcagccaggcacc
gctcacggcgcacacatggtcagatcgaacgtggatcaaggccagatggtgggaggagta
ataggcccgggaggggtggtgaaggaaggcgagaggaggacgacgcacaacatcatcgag
aagaggtatcgctcctccatcaacgacaagatcgtggagctcagagacctggtcatgggc
aatgacgcgaagatacacaagtcaggagtgctgaagaaggctattgactacatcaaatac
ctgcagcaggttaaccacaaactacggcaggagaacctggccctgaagatgggcaaccag
aagaacaagacagtgattctgtctgaggacatggagctcaaagaggaaatagtgatgatg
tctcctccggcctcggactctggttcccctccgcagttctccccttactctgttgactca
gagcccggcagccccttgctggatcacgagcagatgaagatagagccagactctcccccc
tcggttggagtgatggatcgctctcgactgctcctctgcgccctgaccttcttctgcctg
tccctgaacccgctgccctctttgttgggctctgacgcctcggggagccccagcctgtcc
gggggccacgggccgtctagaacgctcgtctggttcccgactcacacacaggacttcgct
tcctggctgcggtgcctgttgccgtgggtgatggtgtgggtgctgagcggcgtgggagcc
gtgtggggttgtgtcagggtgctctacctgtgggagcccgtcacaccccttcactccccg
aaatctgtgtccttctggaggcatcggagacaagcagacctgcatctcaacaggggggac
tatacagcggcgatgggcagtttagagacctgcctgtccgtcttgacccgagcgcttccc
tcgaccaccctggacctggtctgctcgctctcctggaacctcattcgctacgccttgcat
cggccgacccctctgggttggctggtgcatcaggtcggcgggaagcacgagggggaagag
tcaaagaccagcgccaaggacgcagcgctggtttaccaccggctgagccagctgcagctc
acgggaaagctgcctcagcgtaacagcctctgggctttatccgtgtctctcagcgcggtc
aaccttagccagagcgcccagggcaagatggcccccgcccagctcacccagatctacgtc
actgcagcaacagccctgcgcaccgtgctgggccaccacctctcctgtctgcctggttac
ctgttgagttgcgcggagagtgtggccagccaatcagagaccaggccaatccccgactgc
ctgcgctggctcttcacgcctttgggcaggcagttcttcctgagttgtgattggtcggtg
aagtccgagagcagcgacggggtgtacacgtctcagagagaaccaacggaccccatcgcc
cagctgcaccgctgtttctgcaggaagcttttggagagagccgttcacactctcatccag
ccgcagagcgactctgacgcgggcaaacgcaacagtgactctggggagttctccaacgcc
ctggagttcctccaattgttaaacagctgtacagaggactctccgtcccctccgcctccc
ttctcgactcctcccaatcacaccaccactccggtgggagacccggtgagccgttggtgg
gctctggtcctgaaggccaccgtgcattggctgcagggcgatgatgtcgctgtgaggtca
ctgttggtggaagcagagaggatgccgagggctctacacactcttgaccaccctctgcca
aaggctgtgctgctgctctgcaaagctgtccagatgagcctgcctcctgtgaagggagag
ggggcgttagcctacctgtcccactgtgacagagccagcggctacctgcgctccagcatc
tccgtgccggtcgcccagaccgggaactggctgaacaagggggtggagctactgatctgt
gaccttctgctgaccttgaggaccagtttgtggcagcggggaggaagcagtaatggagaa
cctggcccggctcctggatcccagttggctggtttccagagggacctcagcgcgctcaga
aagctcacacagtgctacagacaagcgcaacacaaggtgtttctccatgagaccacggtg
aggctgatggccggagccagccccacaaggacacaccagctgctggagcacaacctccgg
cgcaggacgcacaactcctacacagccggtgagagcctcctgggggagcgcgagagggct
cacgccatcctgctggcctgccgccacctgcccatgccgctgttaaccccgcccgggcat
cgcgcccgcctgctggccgaggccaagcgcaccctggagcgggtgggagaccgtcggtcc
ctgcaggactgtcagcagatcctgctgcgcctcagcgggggcacaaccatcgctgcctcc
tga
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