Gasterosteus aculeatus (three-spined stickleback): 120828124
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Entry
120828124 CDS
T07457
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120828124
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120828124
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120828124
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120828124
NCBI-ProteinID:
XP_040047422
LinkDB
All DBs
Position
XI:complement(4983687..4990019)
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AA seq
619 aa
AA seq
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MRGSYGDRDRDRGRDRDRDRGSPRYGSSRGGPSSGRKFGNPGDRLRKKRWDLDELPKFEK
NFYVEHSEVQRLSEFDIEEYCRKKEITVRGSGCPKPVTHFHQAQFPQYVLDVLVKQNFKE
PTAIQSQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVACDYGKCSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINVGALELSANHNILQIVDVCIESEKEHKLIQLMEEIMAEKENKTIIFAETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSNNKSTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVD
TGRAGGGRPRFRSGGDSNNPNLMYQSECERRMRPAGGGSDKEISRNGRRGSSRDGERSSS
SSSYRDRSSRDGGRSSSYEQFQNTSSSTSSSGSGAGGLVPLPLPLSAVGPQPLMQFNLPQ
PMMGHAPFQFAPPLPPGTE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcttatggcgacagagaccgagacagaggccgcgacagagacagagaccga
ggcagccctcgttacgggtccagcagaggcggcccgtcgtcgggcaggaagtttgggaac
cccggggaccgtctacggaagaagcgatgggacctggacgagcttcctaaattcgagaag
aacttttacgtcgaacattcggaagtgcagcgattaagcgagtttgacatcgaggagtac
tgcaggaaaaaagaaatcactgttcggggttcaggttgcccaaaacccgtcacgcacttc
caccaggcgcagtttccccaatatgtattggatgtcctggtgaagcagaatttcaaggag
cccacagccattcagtcacaaggtttcccattggccctgagcggcagggacatggtgggc
attgctcagacgggctccgggaagacactatcgtacctcctgcctgccattgtgcacatc
aatcatcagccctacctggagcggggagacgggcccatttgcttggtcctggcgcccaca
agagaactggcgcagcaggtccagcaggtggcctgcgattatgggaagtgctcccgcatc
aaaagcacttgtgtgtatgggggtgctcccaagggacctcaaatcagagacctggagaga
ggggttgagatctgcattgccacaccaggtcgtctgatagacttcctcgaagccgggaag
accaacctgcgccgctgcacctacttggttctggatgaagctgaccgcatgctggatatg
ggttttgaaccacagatccgtaagattgtggaccagatcaggcccgacagacagaccctg
atgtggagcgccacgtggcccaaagaggtccgccagctggcagaggacttcctgaaagat
tatgtccaaatcaatgtcggagctctggaactcagcgccaaccacaacatccttcagata
gttgacgtctgtattgagagtgagaaggaacacaagttgatccagctgatggaggagatc
atggctgagaaagagaacaagaccatcatcttcgcggagaccaagaaacgctgtgacgat
ctcacacgcaggatgagacgagacgggtggccagcaatgtgtatccatggcgacaagagc
cagccagagagagactgggtgttatcagaattccgtagcggcaaagctcccatcctcatt
gcaactgacgtggcctctcgtggtttggatgtggaggatgtcaaatttgtcatcaactat
gactatcccaactcgtcggaggactacatccatcgcatcggccgcacggcccgcagcaac
aacaaaagcaccgcctacaccttcttcaccccggggaacctgcggcaggcccgcgagctg
attcgggtgctggaggaggcccgacaggccatcaatcccaaactgctgcagctggtggac
actggacgtgcaggaggtgggcgtcctcgttttcgcagtggcggcgactcgaacaacccc
aacctgatgtaccagagcgagtgtgagaggcgaatgcgccctgcgggcggcggcagcgac
aaagagatcagccggaacggccgcagaggaagcagccgggacggcgagcgctcgtcctct
tcctcctcctacagagatcgcagcagcagggacggcgggcgcagcagctcatacgagcag
ttccagaataccagcagcagcaccagcagttctgggtcgggggccggtgggttggtgccg
ctcccgctcccgctctctgcggtggggccacagccactaatgcagttcaaccttccccag
cccatgatgggccacgcccccttccagttcgcccctccgctgccgccaggcacagagtaa
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