KEGG   Gasterosteus aculeatus (three-spined stickleback): 120828136
Entry
120828136         CDS       T07457                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03020  RNA polymerase
gat03420  Nucleotide excision repair
gat04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120828136 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120828136 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    120828136 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gat03021]
    120828136 (polr2f)
   03400 DNA repair and recombination proteins [BR:gat03400]
    120828136 (polr2f)
Transcription machinery [BR:gat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120828136 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     120828136 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     120828136 (polr2f)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120828136 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 120828136
NCBI-ProteinID: XP_040047443
UniProt: G3NWJ8
LinkDB
Position
XI:complement(4967213..4969275)
AA seq 127 aa
MSDNEDNFDDGDFEDAEEDDGMDDLENAGDEDRENVQILPAGEGQQANLKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DDLIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaagacaacttcgacgacggagactttgaagatgccgaagaagacgat
ggaatggatgacctggaaaacgccggtgatgaggaccgggagaacgtgcagatcctcccg
gcaggagaagggcagcaggccaacctgaagaggatcacgacgccctacatgaccaaatac
gagcgggccagagtgctgggcacgcgagcgctgcagatcgccatgtgcgctccagtcatg
gtggagctggagggagaaaccgaccccttgcaaatagctatgaaagagctcaagagcaga
aagatcccgatcatcatccgcaggtaccttcctgatgggagttatgaggactggggctgc
gacgacctcatcataactgattaa

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