Gasterosteus aculeatus (three-spined stickleback): 120828144
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Entry
120828144 CDS
T07457
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120828144 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120828144 (lrrc4ba)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
NGL family
120828144 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Ig_6
Motif
Other DBs
NCBI-GeneID:
120828144
NCBI-ProteinID:
XP_040047449
UniProt:
A0AAQ4Q2X7
LinkDB
All DBs
Position
XI:complement(13868731..13889496)
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLVRLLLPGPESVGAASPCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYKVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEDSALVATNETFIGVHPGP
TPSGHLWPGGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSRSSGIVGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGPGSGVGLNN
NNNPSPCSQSQSTSISCSQVPTSGGMATGGTLPSSVPLPQLGLHSSLKGIMGKSQKEPLL
FKSSSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctagtgcggctcctcctccccgggccggagtcggtgggagccgcctccccctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcacccggcaaaacctg
gaggaggtgcccgaaagcatatcggtcaacacgcgatacctcaacctgcaggagaactcg
atacaggtaatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcgttcaatggcctccccaacctcaac
acgctggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccattgagactctgccgggctatgcc
ttccaccgcgtgccctcgcttcgtcgcctggacctcggggagctcaagaagttggatttc
atctctgacgcagccttcgtgggcctcattaatctacgctacctgaacctggggatgtgc
gggctgaaggacattcccaaactgacggccctcgtgcgtttagaggagcttgaactgtca
ggaaacaggctggagattatccgaccaggttccttccagggcctggtgtccctccgtaag
ctctggctgatgcactcacaggtgtccgtcatcgagcgcaacgccttcgatgacctgaaa
agcctggaagagctcaacctgtcgcataactccctgcactccttgccccacgatctcttc
acaccgcttcaccagctggagagagtgcacctcaaccataacccgtggatctgcaactgt
gatgtcctttggcttagttggtggttgaaagagacagtgcccagcaacaccacctgctgt
gcccgctgccatgcccctccattcttgaaaggcaagtacattggggaactcgaccagagc
cacttcacctgctatgcaccggtcatcgtggagcctcctacagacctcaatgtcaccgag
ggtatggccgctgagctcaagtgtcgcacgagcacctcgacaacgtccgtcaactggatc
acccccaatggcacactaatgacccacggctcttacaaggtgcggatatccgtcctgcac
gacggcacgctcaacttcaccaatgtcaccctgcgagacacggggcagtacacctgcatg
gtcaccaacgctgctggcaataccaccgcgactgctgtcctaaatgtcaccgccgcggat
gccagcgtgaactacacctacttcaccacagtcacagtggaaacggttgagaccccagga
gacgaagactccgcattggtcgccaccaatgagacattcatcggtgttcaccctgggccc
acgccctcgggtcatctgtggcccggaggcgttcctacaactgcctcctccctgtcagca
ggctggtcctcctcctctccacgggccacccgacccaccttcactgtgcccatcactgag
ccgggcttctcgggcttggatgatgtcatgaagaccaccaagatcatcataggctgcttt
gtggccatcaccttcatggcagcggtgatgctggtggtcttctacaagctgaggaagcag
caccagctgcataaacaccacggccctgcccgtgccatcgaaatcatcaacgtggaggat
gagctgggggccggggccagcggtcgaggcagcggcatctcgggaggctccacagtgacg
cagagcagaagcagtggaatagtaggaggccagagcctcaggctacaccacccggagata
gtcaacctgccgaacttggcccgatcggagcacctaaaccactactacaaaactcatcac
ttcaacaacaacatgatgggcctgggcatgggcccggggtctggcgtgggcctcaacaac
aacaacaacccctcgccttgctctcagtcccagagcacgtccatatcctgttcccaggtt
ccgaccagtggaggaatggccacaggtggcaccctgccctcctctgtgcccctgccccag
ttgggtctccacagttctctgaaaggcattatggggaaaagccagaaagagccccttctt
tttaagagcagctctaaggaaaatgtgcaagagactcaaatttga
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