Gasterosteus aculeatus (three-spined stickleback): 120828155
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Entry
120828155 CDS
T07457
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120828155 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120828155 (cpsf4)
03019 Messenger RNA biogenesis [BR:
gat03019
]
120828155 (cpsf4)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120828155 (cpsf4)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120828155 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
120828155
NCBI-ProteinID:
XP_040047491
UniProt:
A0AAQ4RTW2
LinkDB
All DBs
Position
XI:5527391..5530908
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AA seq
266 aa
AA seq
DB search
MQDILANVDHLKFDLELAMQQQLGAQPLPFPGMDKSGSAVCEFFMRAACQKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LQQQIQNQTKPVPTIGRSSLSLIQLTNSSPGMRPQNHMPMAHSHQNNMPGNRGPRPLDQV
TCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatactagctaacgtggaccacctcaagtttgacttggagctggctatgcag
cagcagctcggggcacagccgctgcccttccccggcatggacaaatccgggtcggctgtc
tgcgagttcttcatgagagcggcatgtcagaaaggtgggatgtgtccgttccgtcacatc
agtggagagaagacggtggtgtgtaagcattggctcagagggctgtgtaagaagggggac
cagtgcgagttcctccatgaatacgacatgaccaagatgcctgaatgctacttctactca
aagtttggtgagtgcagcaacaaggaatgtccgtttctgcacattgatccagagtccaag
atcaaagactgtccctggtatgaccggggcttctgcaaacacggtcctgactgcagacac
agacacacacgaagggtgatctgtatgaattacctggtgggcttctgtcctgagggaaaa
tcctgtaaatttatgcacccacgttttgaattgcctatgggagcttctgaacagcctcct
ctacaacagcaaattcagaaccagacaaaacctgttcctactatcggccgctcgtcgctc
tctcttatccagctgaccaactccagtccgggcatgcggccgcagaaccacatgcccatg
gctcattctcaccagaacaacatgcccggcaacagagggcctcggccgctagaccaggtc
acctgctacaagtgtggtgagaagggccactatgccaacaaatgcactaaaggccatctt
gccttcttgagtggacaataa
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integrated database retrieval system
