Gasterosteus aculeatus (three-spined stickleback): 120828214
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Entry
120828214 CDS
T07457
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120828214 (rnf169)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120828214 (rnf169)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120828214 (rnf169)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120828214 (rnf169)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
120828214 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4142
Motif
Other DBs
NCBI-GeneID:
120828214
NCBI-ProteinID:
XP_040047587
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All DBs
Position
I:167582..175206
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AA seq
600 aa
AA seq
DB search
MTDGDCLYVRCKRVSNLRSGAGLVFESEPGKDARTEGSAERPGRPAKYGTVAGCGSTSSA
PQSEPEQCAGRRPSGSPPPAPPACRLRRTPRRPGSGERLRRRSEPGRGSSAAGRRDRDPR
KECFVSPAKCCDTSSAPTSKHKPGAEEREEAKRRTCRDKDVPGVLSDSENEEPFSRRIRN
ISAFIRKTQNSVAASSGVQRSQSCSEPVEDPGWKTKVIQPALMDRVGISHSYAAGILLSS
ENSRSVSAAITADRQLAWRAVVSSSAAGGAPPHPERSISPESNDSISEELNHFKPIVCSP
CTPPKRLPDGRLLEPAVVKSTPRNLTRGLQKATSYEASPAVLQKWRQIELDRQNLKTNSR
ATLTSPVNEPPHRKSGGVEEAEGRGSPQGRDGVRAANKRMLLFEPLAGDAGSFQKHAVKI
RVPAIRYSSETGLRGTSDFEPAIGAPESGGALHFSQKQQQTKSFSPYTKNSGLQSCKLVP
KASQSPRKESDSSLHNQSISRRGKKREQKTKHLDSEQEPDLKKRRSLSQEAFDECYVRQI
QQERQDRAVALRLQRQFDRENQTTDRRRSPDQYFLRSWISSKNHRRRRGLRRSRRINKKH
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggggactgcttgtacgtgcgctgcaaacgcgtttcaaatctgcgcagcggg
gcggggcttgtttttgagagcgaaccagggaaagatgcgcgaaccgaagggtccgccgaa
cggcccggtagaccggccaagtacgggaccgtagctgggtgcgggtccacttccagtgcg
ccgcagagcgagccggagcagtgtgcggggaggcggcccagcggcagcccgccccccgct
cccccggcatgtcgactccgccggaccccgagacgccccggcagtggagagcggctccgg
aggaggagcgagcccgggagagggagcagcgcggcgggcaggagggaccgcgacccccgg
aaagagtgcttcgtgtctccggctaaatgttgtgatacttcgtcagcgcctactagcaaa
cacaagccgggggccgaggaaagagaagaggcgaagaggaggacttgtagagacaaagac
gtgccaggagttctgtcggactctgagaacgaggaaccttttagcaggaggatcagaaac
atctcagccttcataaggaaaacccagaactcagtggccgcctcaagtggtgttcagagg
agtcagagctgcagtgagccagtggaggacccaggatggaagacgaaggtcatccagccc
gccctcatggacagagtgggcatcagtcacagctacgcagcaggaatcctcctctcctcg
gagaacagccgctccgtctccgctgcgatcactgccgaccgccagctggcctggcgagcc
gtcgtctcctcgagtgcggccggcggcgcccccccgcaccccgagcgctccatcagcccc
gagagcaacgacagcatctcagaggagctcaaccacttcaagcccattgtgtgctcgccg
tgcactccgcccaagcgcctgccggacggccgcctgctggagcccgccgtggtgaagtcc
acacccaggaacctgacccgtggcctgcagaaggccaccagctacgaggccagccccgcg
gtgctgcagaagtggaggcagatcgaactggaccgccagaacctcaagaccaactccagg
gcgaccctgacaagccccgtcaacgagccgccccaccgcaagtccggcggggtggaggag
gccgagggccgcgggtctccacagggacgggatggggtgcgggccgccaacaagaggatg
ctgctgtttgagcctctggccggagatgcaggctccttccagaagcatgccgtaaagatc
cgggtccccgcgatccgttacagcagcgagaccggactccgaggaacctctgactttgag
ccggcaatcggcgctcctgaatccggcggcgcgttgcatttcagccaaaaacaacaacaa
acaaagtcattttcaccgtataccaagaactccggtttacaatcctgtaaattggtgccg
aaggcctcgcagagtcccaggaaggagtccgacagcagccttcacaaccagtccatctcg
aggaggggcaagaagcgggagcagaagaccaaacacttggactcagagcaggagccggat
ctgaagaagcgccgctcgctcagccaggaggcctttgacgagtgctacgtccgtcagatc
cagcaggagcgccaggaccgggccgtcgccttgagactgcagagacagtttgaccgggag
aaccagaccaccgaccgtcgaagaagccctgaccagtacttcctgcgatcctggatttcc
agcaagaaccaccgacgtaggcgtggcctgaggaggtctcgacgaatcaacaagaagcac
taa
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