Gasterosteus aculeatus (three-spined stickleback): 120828355
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Entry
120828355 CDS
T07457
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120828355 (recql5)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120828355 (recql5)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120828355 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
TFIIS_M
EloA-BP1
SRI
ResIII
Motif
Other DBs
NCBI-GeneID:
120828355
NCBI-ProteinID:
XP_040047823
LinkDB
All DBs
Position
XI:13592791..13601910
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AA seq
985 aa
AA seq
DB search
MTTTLKQALKTHFGFDNFRSKVQEDVVKVVVKGDRDVFVCMPTGAGKSLCYQLPAVMAEG
ITLVISPLIALIQDQVDHLRNLNIPACSINSKLPAAERRLILADLGSSSPKLKLLYITPE
MVASPSFQPCLSGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGRLRGVPCLAL
TATAPKNVQEDIVQSLGLRSPQTFVTPVFRSNLHYDVIFRELLPNPYVHLHAFVQEALAL
DSGSNQQGCGIVYCRTREGCETVAHQLTKLGVLAKPYHAGLRAGDRTEVQNEWMQGKVLV
IVATISFGMGVDKANVRFVAHWNFAKSLASYYQESGRAGRDGLPSSCRTYYSPRDKEQLN
FLIRKEVARRQEKRGCAKETDKSAITDFDAMVSFCAQEACRHATISKFFGDKTPDCAGSC
DFCRDPKAVRAQLEKAAVLSTTTAAQGAGAAGPFGFQRGLYEGGRKGYGFERFDEGDAGS
GEEDGSLRKKEFSDLFKQQMNMRKVVTDRQREAFVPPDADCPLREAGSQRIPKLTVKARE
HCLCLLKEALYGHQRSEDAFSDSLSAAVDAEHEVFKSSKSSNLYKAAVLKKVSQIKKSSS
GGQGQGVQSDGGSENGSKIKEEEPLSSSSSFSEELRGFTSASEIYSMKRKRVGAGLRGSS
DPFLTARELLKLPGDGSAGSGETGAEAPSAVTSSVGTRANAAAAAAVVSLSSPPKAGRAA
SRKQQKLAEAAKSSRDISQYFAKKDKTEKSREEAEPQKAPDATSPADVALDENEEAVEDA
ETSRVVDGIQEGSKREVIVLRDEEGDEGDAHETETSSRLREAAPEEDIQAAAETKKAEEE
ARPSLRGEWTEGAKAERRSSPPAKRRRPADRRVTFNPTVQQRAPLHAAEPPAPATLREAA
DIVVRCLDPFYTEGKFATKELFKSFARHLSHLLAEGRSQGKGQVKAEAKALIKTFFSGVE
RCESEADWKHLKSPQSCKTSEIHKE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactctaaaacaagctttaaaaacccactttgggttcgacaacttccgatct
aaagtgcaggaggatgtcgttaaagtagtagttaaaggtgacagggatgtgtttgtgtgc
atgcccactggagcaggaaagtccctctgttaccagctgcctgctgtcatggccgagggt
attactctggttatatccccgctgatcgccctcatccaggaccaggtggaccacctgagg
aacctgaacatccccgcctgctccatcaactccaagctgccagcggccgagcgccgtctg
atcctggccgacctcgggagcagcagccccaagctgaagctgctgtacatcacccccgag
atggtggcctctccctcgttccagccctgcctgagcggcctgtgctcccgcggcctgctg
tcttacctggctgtggacgaggctcactgcgtctcccagtggggccacgacttcaggccg
gactacctgaaactgggagagctgcgcgggcgcctgcggggggttccctgcttggccctc
acggcaacagcgcccaagaacgtacaggaggacattgttcagtccctggggctgcgctcg
ccgcagaccttcgtgacacccgtgttccgcagcaacctgcactacgacgtgatcttcagg
gagctgctgccgaacccttacgtccacctgcacgccttcgttcaggaggcgctggcgctg
gacagcggctccaatcagcagggctgtgggattgtgtactgtcggaccagggaaggctgt
gaaacagtggctcaccagctgaccaagctcggagtcttggccaaaccgtaccatgcaggc
ctgagagcaggagatcgcacagaggtccagaatgagtggatgcaagggaaggtgctggtc
atcgtagccaccatcagcttcgggatgggagtcgacaaggcgaatgtcaggtttgtagct
cactggaatttcgccaagtcgctggcgagttactaccaagagtctgggcgagctgggagg
gacgggcttccctcctcctgtcgcacgtactactccccgagagacaaggagcaattgaac
ttcctcatccggaaggaggtggcccgcagacaggagaaacgagggtgtgcaaaggagacg
gacaaatcggccatcacggactttgatgccatggtgtcgttctgtgctcaagaagcctgt
cgccacgccaccatctccaagttcttcggggacaagacgccggactgcgccggctcctgc
gacttctgccgcgaccccaaagccgtgcgcgcccagctggagaaggcggccgtgctcagc
accacgaccgcagcgcagggcgcgggggccgcggggcccttcggcttccagcgaggcctc
tacgaaggggggaggaagggctacggcttcgaaaggttcgacgagggggacgccggtagc
ggcgaggaggacggctcgctgaggaagaaggagttttcagacctcttcaagcagcagatg
aacatgcggaaggtggtgacggatcgtcagagggaagcctttgttcccccggacgccgac
tgcccgctcagagaggccggcagccagaggatccccaaactcaccgtgaaggcccgagaa
cactgcctgtgcctcttgaaggaggctttatatggccaccagaggtcagaagacgcattc
agcgacagtctgtcggcggccgtcgacgccgaacacgaggtcttcaagagctccaagtcc
tccaacttgtacaaagctgcggtcctgaagaaggtctcgcagattaagaagtcgtcgtct
ggaggacaaggacaaggtgtccagtctgacggcggcagtgaaaacggctccaaaatcaaa
gaggaagagcccctgtcctcttcgtcctccttctctgaggagctgcgggggttcacatct
gcatccgagatctactccatgaagcgtaagcgagtcggagccggtctgagaggatcctcc
gaccccttcctgaccgccagggagctgctgaagctccccggcgacggctcagcaggctcc
ggagagaccggcgccgaggcgccttcggctgtgacgtcgtccgtggggaccagagcgaac
gccgccgccgccgccgccgtcgtctccctgagcagcccgccgaaggccggcagagccgcc
agcaggaagcagcagaaactagcggaagcggccaagagctcccgcgacatctcccagtat
ttcgcgaagaaagataagacggagaaaagccgcgaggaggcggagccgcagaaggcgccg
gacgcaacgtcgcccgcggacgtcgctctcgatgaaaacgaggaagccgtggaagacgcg
gagacgagtcgagtggtggacgggatccaagaaggaagtaagagggaagtcatagttcta
cgcgatgaggagggcgatgaaggggacgcgcacgaaacggagacgtcgtcgcggcttcgg
gaggcggctcctgaggaggacatccaggccgccgcagagacaaagaaagcagaagaagaa
gcgagaccgtctctaagaggagagtggacagagggcgcgaaagccgagcggcgctcgtct
cctccggccaagcgccgccgccccgccgaccggagggtgaccttcaaccccaccgtgcag
cagagggccccgctgcacgccgccgagccccccgcgcccgccacgctgagggaggcggcc
gacatcgtggtccgctgcctggaccccttctacaccgagggcaagttcgccaccaaggag
ctgttcaagtcgttcgcccgccacttatctcacctgctcgcggaggggcggagtcagggg
aagggccaagttaaagcagaggccaaagcgctcatcaagacgttcttcagcggcgtggag
cgctgcgagagcgaggccgactggaagcacctcaaaagcccgcaaagctgcaaaacctcg
gagatccacaaggaatga
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