Gasterosteus aculeatus (three-spined stickleback): 120828384
Help
Entry
120828384 CDS
T07457
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04517
IgSF CAM signaling
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120828384
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120828384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120828384
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120828384
Intermediate filaments
Intermediate filament-binding proteins
120828384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
120828384
NCBI-ProteinID:
XP_040047903
LinkDB
All DBs
Position
1:complement(16419557..16477489)
Genome browser
AA seq
2600 aa
AA seq
DB search
MANASPDLDNVEAQRQLNNNNRQSSSGFWETECTSSKLFECSRIRALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRSDLIEFNKLTRSNATHNLQQAFNVA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLENCVEAE
KIINRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLLAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMETEAYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMDDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRREELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSDKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVVALRKHMGALPLQYREQKEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLGSMLRLQNYLL
ECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEQM
ATAHPARAMEVLMPFDGINVEWEELKRTLQGCEDSLMVAGRLQSFIQDLDSFLTWLVQTQ
TAAASDLLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNDLLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
LAHQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMAKDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSTGVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMESQMETWYKEVGQLQMQ
VASIPQQTQIKETVAGRQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPMAMSHEHGSSLQAVQQLMKKNQTLQRELQGHRSRMDDVLERAGIIASIRSPEADCV
RAGRDQLAQLWALLWAETERRQLILDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETVGLLSQQCRQLLEMGHPDCEQISKRQCQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTANTSTLQRLLHSFEQDIQLMVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQLWKELLTSCEECRVQITTETDKLRFFGMVR
DQMMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLQSEVEARSRSTLECIEMGKTLLAAR
NPAAEEIKEKLDKVVAKQYELSEKWDKHWDVLQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASPGVSTLPRLPLSPVMRQTIYEQNEANSPRSPSPATPTPSPSSVARRLGSTV
ANYTPVMNGSGYRRALEARHSGVVGVAAGLGQPAPSSIASVAAAAMLVSANQARENDGAP
RDQVTKAMTHLHPAHAARTLEAKSSPYLRQAKIKHMDDAVTPLIVASRLEKAREKERARE
RDIMMGEIGTEKAEVAVMAEVVLQEPCRERLHSEPTRGPRGSRTDPLGQAEPQVQTHRDH
RMERQLSSEQLIQARRDELPQELWREQAERREKRGLERQTSSEHEGHGGHEGRRRERDRH
RLERQESSEHDTGKEHSDRRSAGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNGVPEKP
ARLDRPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPVVPQPPAHNAHHEGFLFRKLD
IETLKKSTNRWVFRVMIMGITSGLAEDRSSRAGGWTLVSSLSGFRVSDQFFNLPEKNQFM
CSSWMITNIFIFHSRSILMI
NT seq
7803 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctcccctgacctggacaacgtggaagcccagcgccaactcaacaacaac
aaccgacaaagcagctcgggattctgggagacggagtgcaccagctcaaagctgttcgag
tgctcccgcatcagagccctggcagacgagcgagatgcagtgcagaagaagacgtttacc
aagtgggttaactcccacctggcccgagtgtcctgtcgcatagcagacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgcca
aggcctacacggggccgtatgcggatccactgcctggagaacgtagacaaagccctgcag
ttcctcaaagagcagcgggtccacctggaaaatgtgggctcccacgacattgtggatggc
aaccaccgcctcaccctaggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacggaggacaacagggaaactcgctctgccaaggacgccctgctgctc
tggtgccagatgaagactgcagggtaccctgaggtgaacatccagaacttcaccacctgc
tggagagacggcctcgcctttaacgccctcatacacagacaccggtctgacctgatagag
ttcaacaagctgacgcggtccaatgccacccacaacctccagcaagccttcaacgtcgct
gagcagcacctgggcctcaccaaactcctggaccctgaggatgtgaacacagagaaccca
gacgaaaagtccatcatcacatatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtccttgaaaactgcgttgaggcggag
aagatcatcaaccgctacgaggccctggcctcggacctgctggactggatagagaagacc
atcgcggtcatcagcaaccagaagtttgccaactcactgacgggagttcagcagcagcta
ctggccttcacaacctactgcactattgagaagcccatcaagtttcaggaaaaggggaat
ctcgaggtccttctgttcaccatccaaagcaagctcagagccaacaaccagaaaccctac
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctagagaag
gcggaacacgaaaggggcgtcgctctgcgcaaggagctgattcgtcaggagaagctggag
ctgcttgctcagtgcttcgatcacaaaaccaccatgagacaagcctggctcaatgagaac
caacggctcgtgtcgcaggacaattttggctacgacctaccagcagtcgaggcggccatg
aagaagcatgaggccatcgaggcggacatcgcctcgtacgaagagcgcatcggcgtggtg
gtggagctggcggcggagatggagacagaagcatactacgacattcggcgtatcctagca
cgcaaagagaacatcctgggccagtggagtctgctgaaggagctggtggccgggaggagg
acccggctggagaagaacctggccctgcagaagaccttccaggacatggtctacatgatc
gactggatggatgacacacaggtccagcttctgtccaaggactttgggaagcacctcctg
gaggtggacgacttgctgcagaaacacagcctgcaggaagccgacatcgcagtgcaggcc
gagagggttgagacgctcaacactgctgcactcaaattcacaactatagagggttaccag
ccctgcgacccacaggtgatctgtaaccgcgtcaaccacgtctctacctgtctggaggag
ctgaaacaactggcagctaaaaggcgagaggagctggaggagtcgagacagctgtgggcc
ttttttcaggagctggaggagtcggaggcctggatccgggagaagagctccatcctggga
gctcagggttacgggaaggacctgagcagcgtgctgaagttacttcagaaacacaagacc
ctggctggagaactgctggcccaccgctcgctgctgcagaacaccatgaaacgaggaaag
cagatcctgagcgacaagagcttcggcacggcgggcatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgtctcggccacctgcaggag
gcgctcaactttttccagttctccacggagacggacgacctggtggcgtggctgcaggac
gcctaccgcctggtttccagcgaagactttggacacgatgaatactccacccagtcgctt
ctgaagaagcaccggggggtcagcgaggccgttgataagcaccgtatgcacgtggtggca
ctgcggaaacatatgggggcgctgcctctgcagtacagagagcagaaggaggtgcaggtg
cgcatgggagaggtggagcagctttacaccgaagtggccgaggtggcggtgctcagacag
cagtggcttcacgacgccctcgccgtctaccgcatgttcagcgaggtcaacgcctgcgag
ctgtggatcgacgagaaggagcagtggctggacaagatggagatcccggagagactggag
gacgtggagatggtggcacacaggtttgagagcttagaccaggagatgaacagcctgatg
ggaaggatcctagacgttaaccagatagttcagcagctgctggatggaggtcatccttcc
tccacagaggtcagaggttgtcaggatcacctcaactccaggtggaacagcatagtggag
ctggtggagcagaagaaggatcagctgggctccatgctgcggctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggaaaagagaaaagccatcgacgccacccag
tacgtgggcagcgacctggggggagtcctggctctgcagagacgcctctccaccatggag
ggggccctgtcggtcctggagcccaaactgctgcacctgcaggaggaggcggagcaaatg
gccacagcccacccggctcgggccatggaggtgctcatgccgttcgatggcatcaacgtg
gagtgggaggagctgaaacgcaccctgcagggctgcgaggactcactgatggtggctggt
cggctgcagagcttcatacaggacctcgactctttcctcacctggttggtccagacgcag
acggccgccgcctctgacctgcttcccaacgacctggaagaggcagagaagctcattaac
aaacacgcagcgctgaaagaggagatcggacggtacgaggaggactacgagcgcctgcag
gccatgaacgacctgctcgagtctgaggaggctcccttacctcaagccgccctgcagcag
tggctgcagaagctcgacgtcggctggaacaaactcctggagatgtgggagagccggaga
gaagttctggtccaggctcacatcttccacctcttcctgcgagatgtcaaacaggccgaa
tccttcctgaacaaccaggagtcggcgcttgctcacgtggagcttcccaccacagtggaa
acggtggaggccgccatcaagaaacacaaagacttcaccaccaccatggagctgaacctg
cacagaatcaaagcggtgatcgaggccggggagagtctgatcagccagagcaacatctac
tccgaccgcatcaaggaacgcatcgacacgctcgccaacaggggaaaccagaacagagag
ctggcccaccagtggctggaaaagctgaacgaccagtgggaacttcagaggtttcttcag
gactgccacgagctgggggactgggtgtgtgaaaagatgctgatggcgaaggacagcagc
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaacaaggaatggctggataaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagcaccggggtccggaggaagctggaggagatcagggagtgctgg
caggacctggagagcaccacccaggccaaagcccgccagctctttgaggccaacaaggcg
gacctgctggtgcagagctacgaaagcctggaccagagactgggccaattggagggtcag
ctggcctatgtggaccagggacaggacctcaccactgtcaacaagcagctgaaaaaacta
cataccatggagagccagatggagacgtggtataaagaggtggggcagctccagatgcag
gtggcttccatcccgcagcagacgcagatcaaggagacggttgcgggccgccaagccgtt
gtggaggccaggatggtgcgtctgatcgagccgctgaaagagaggcggcgcatccttctg
gcgtcaaaggaagttcatcaagtcgggcgagacctggaggatgagattttgtgggtccag
gagcgcctcccaatggccatgtctcatgagcacggctcgtctctgcaggcagtacagcag
ctcatgaagaagaaccagacacttcagagggagctgcagggccacaggagcaggatggac
gacgtcctcgagagggcggggatcatcgcctccatccgcagcccggaggccgactgcgtc
cgggcgggccgcgaccagctcgcccagctgtgggctctgctctgggccgagaccgagaga
aggcagctgatcctagacgccatgtaccaggcccagcaatactacttcgacacggctgag
gtggaggcttggctgagcgagcaggagctgcacatgatgaacgaggagaaggggaaggac
gaaccgagcacactgcagctgctgaagaaacacttggtgctggaacagaccatcgaggac
tacgccgagaccgtcggcctgctgtcacagcagtgtcgccaactgctggagatgggccat
ccagactgcgagcagatcagcaagcgtcagtgtcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagagaaagagccgcctggagcagcagtactggctctaccagctc
aacagggaggtggacgagctggagcagtggatcgctcagagggaggtggtcgccagctcg
ccggaactgggccaggactacgagcatgtcaccgtgctccaagagaagttcacagagttt
gcgtcagagacgggcagcgtggggcaggagcgagtgacggcagtcaaccagatggtggac
gagctcatcgactacggacactcggacgccgccaccatagccgagtggaaggacggggtg
aacgaggcctgggccgacctgctggagctcatggagacgcgggcgcagatgctcgccgcc
tcacatcagctgcacaagttcttctccgactgcagagaggtgctggcccaaatcgaggac
aagcaccgccggctgcctgaagtgcgggctcggcagggcagcactgccaacaccagcacc
ctacagagactcctgcacagcttcgagcaggacattcagctgatggtcacacaggtccgt
cagctgcaggagagcgcggcccagctgaggacggtgtacgccggcgagaaggccgaggcc
atcgcgtgccgcgagcacgaggtgatgcagctgtggaaggagctgctgacgtcctgcgag
gagtgccgggtgcagatcaccactgagacggacaagctgaggttctttggaatggttcga
gatcagatgatgtggatggaatcgatcatctgtcagattgggacaggagagaagcccagg
gacgtgtcctcagtggaggtgctgatgaattaccaccagagtctgcagagcgaggtggag
gctcgcagccgtagcaccctggagtgtatcgagatgggcaaaactctgctggctgctcga
aacccagcagccgaagagatcaaggagaagctggacaaggtggttgctaagcaatatgag
ctgtctgagaagtgggacaaacactgggacgtcctacagcaattgttggaggtccaccag
tttgcccaggaggcggtggtggcggaggcctggctgacggctcaggagccgctcatcagc
agcaacgagctgggcgccagtgtagacgaggtggagcagctgattcgtcgacacgaagcc
ttccgcaaagccgctgccacctgggaggagcgattcagctcactgcggcgactgaccacg
gtagaaaagctaaaagccgagcaaagcaaactaccgccgaccccgctgctgggtcgtaaa
gtcttcctggaccctcaagatgcctcacccggtgtgtccacccttccccgcctccccctg
tcccccgtcatgagacagactatctatgagcagaacgaagccaattctccacgctcgccc
tcgcccgccacgcccacaccctctccctcgtccgtggcccgtcggctggggtcgacggtc
gccaactacacccccgtgatgaacggctccggctaccgccgcgcgctggaggcgcggcac
agcggcgtcgtgggcgtggccgcagggctgggccagcccgcgccctcctcgatcgcctca
gttgccgcggcggccatgctggtatcggccaaccaggcgcgagagaacgacggcgcgccg
agggaccaagtgactaaggcgatgactcacctccacccggcacacgcggcgaggacgctg
gaggccaaatcgtcgccgtatctgcggcaagccaaaatcaaacacatggacgacgcagtg
acgccgctgatcgtggccagccgactggagaaggcgcgggagaaggagagagcgagggag
agggacatcatgatgggggagatagggacggagaaagcggaggtggccgtgatggccgag
gtggtgctccaggagccgtgcagggagcgcctgcacagcgagcccaccagagggccgcgg
ggatccaggaccgacccgctgggccaggctgagccccaggtccagacccacagggaccac
aggatggagcggcagctgtccagcgagcagctgatccaggctcgcagggacgagctgcct
caggagttgtggagggaacaggccgagaggcgggagaaacgggggctggaaaggcagacg
tccagtgagcacgagggccacgggggccacgagggccggcggagagagagagaccgacac
cggctggagagacaggaatccagtgagcatgacaccgggaaagagcactcagacagacgc
tcagccggaggagagaagagatccaccatggcagaaattgtagagcagctgcaagaaagg
gaagcagcacaggcccgtggcgaggtgccccgcctgcccaacggggtgccggagaagccc
gcccgcctggaccgaccccgagcccgggacaggcccaaaccgcggcgtcgaccacggccc
aaagaggcgggagagaccacgcggcggtccaggtcggctccggcccagagcagcccggtg
gtcccccagccgccagcacacaacgcacaccacgagggcttcctgttccgcaagctggac
atcgagaccctgaagaagagcaccaacaggtgggtgttcagggtcatgatcatgggcata
acatctggtctagcagaagatagaagtagtagagcgggaggatggacactggtgtcatca
ctatcaggcttcagggtttccgatcaattctttaatttaccagaaaaaaatcaattcatg
tgttccagttggatgattaccaacatttttatattccacagtcgatcaatattgatgatt
tga
DBGET
integrated database retrieval system
