Gasterosteus aculeatus (three-spined stickleback): 120828437
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Entry
120828437 CDS
T07457
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03266
Virion - Herpesvirus
gat04081
Hormone signaling
gat04145
Phagosome
gat04148
Efferocytosis
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120828437
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120828437
04512 ECM-receptor interaction
120828437
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120828437
04148 Efferocytosis
120828437
09144 Cellular community - eukaryotes
04510 Focal adhesion
120828437
09142 Cell motility
04820 Cytoskeleton in muscle cells
120828437
04810 Regulation of actin cytoskeleton
120828437
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120828437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120828437
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120828437
04515 Cell adhesion molecules [BR:
gat04515
]
120828437
04090 CD molecules [BR:
gat04090
]
120828437
Membrane trafficking [BR:
gat04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120828437
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120828437
Cell adhesion molecules [BR:
gat04515
]
Integrins
Integrin beta subunits
120828437
CD molecules [BR:
gat04090
]
Proteins
120828437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
120828437
NCBI-ProteinID:
XP_040047937
UniProt:
A0AAQ4PMD6
LinkDB
All DBs
Position
XI:6954391..6963560
Genome browser
AA seq
786 aa
AA seq
DB search
MGNLLHRLVILFLFFLSASKVFGSNICTSQGVTTCRQCMAVHPRCAWCSKEEYGKGGSGA
SRCDYKENLLKGGCSPAAVEFPSSTLSIDKNAPLSDKASGQADDVTQIKPQKLGITLRPG
DSQRFTVSVKQAEDYPVDLYYLMDLSFSMKDDLARLRTLGSELADTMGHTTSKLRMGFGA
FVDKTTSPYMYTNPAEALENPCYGIHQKCQAQFGFKHVLSLTEKVARFTEEVEKQQVSRN
RDAPEGGFDAVMQAVVCKDRIGWRPDASHLLVFTTDAKTHIALDGRIAGIVQPNDGKCHL
DNENVYNKSTVLDYPSLALMTEKMSENNINLIFAVTDYVVPLYKEYSQLIPGTTVGTLSD
DSGNVIKLIVDAYAKIRSKVELELLGVPEELHLSFNATCLNEEVIPGLKSCSGLKIGDTV
SFSVEAQLRVCPKEKRHSFTIKPRGFKDSLEVTVDFACGCDCEADAKADSPLCSNGNGTY
ECGVCQCHPGRLGPRCECSVEDYSPSDDANCIPKPGAPICSGRGDCLCGQCSCHGNEFGQ
VWGKYCECDDFNCLRFKGALCSDHGKCSCGLCQCDAGWKGENCNCSTVVDTCMSSIGLLC
SGRGSCQCGVCQCTQPGAYGDTCEKCPTCPDACTIKKECVECQHFKRGQYIEDNSCSIIC
KNEINLVEELGFHANAVNCSYKDENDCVVHFQYYEDGSGKSILDVVKEPECPQGADILVV
LLAVAGAILLLGLIGMLIWKLLVTIHDRREFVKFEEEKAKAKWDTANNPLYKEATSTFTN
VAYRGN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccttttacaccgtctggttattctgtttctcttcttcttatcggcatcaaag
gttttcggttccaacatctgcacgtcacaaggagtcaccacgtgtcgtcagtgcatggct
gtgcaccctcgatgtgcgtggtgctctaaggaggaatacgggaagggggggtcgggtgcg
tcccgctgtgactacaaagagaatctgctaaaaggaggatgcagtccggcagccgtggag
tttccatccagcaccctgagcattgacaagaacgcgccgctcagcgacaaagcctcgggc
caagctgatgatgttacccagataaagcctcagaaactgggcatcaccctacgaccagga
gattcccagcgtttcaccgtgtcagtgaaacaggcggaggattacccagtggacctctac
tatctgatggatctttccttttcaatgaaggatgacttggctcgtcttcgcacactgggc
agtgagcttgccgacaccatgggccacaccaccagcaaactgcgcatggggtttggggcc
tttgtggacaagaccacctccccttacatgtacaccaaccctgcggaagcattggaaaac
ccttgctatggaattcatcagaaatgccaggcccaattcgggttcaagcatgtgctgtca
ctgacggagaaggtggctcgcttcactgaggaggtggagaaacagcaggtgtctagaaac
agagatgctccagaggggggttttgatgctgtcatgcaggccgtggtgtgcaaggacagg
attgggtggcgtccggatgcctcacacctgttggttttcaccaccgatgccaagactcac
atcgctctggatggacgcatagctggaatcgtccagcccaatgatggaaaatgtcacctt
gataatgagaatgtttacaacaaatccactgtgctggattatccttccctggcgctcatg
accgagaaaatgtctgaaaacaacatcaatttaatctttgccgtgacggactacgtggtt
ccactttacaaggagtacagtcagctcattccaggcacaactgtgggaacactgtccgat
gactctggcaatgttattaagctcattgtggatgcttacgctaaaatccgctctaaggtg
gagctggagttactgggagtcccagaagagttgcatctctccttcaatgccacttgcctg
aatgaagaagtcattcctggactgaaatcctgctccggcctcaagattggagacacggtg
tcgttcagcgtggaggcgcagttgcgcgtctgtcccaaagagaagagacactctttcacc
atcaagcctcgaggtttcaaggactcgctggaggtcaccgtggacttcgcctgcggctgc
gactgcgaggcggacgccaaagccgacagccccctctgcagcaacggcaacgggacctac
gagtgcggcgtgtgtcagtgtcacccggggcgcctgggcccgaggtgcgagtgttcggtg
gaggactacagtccatccgatgacgccaactgcatcccgaagccaggggcgccgatctgc
agcgggagaggagactgcttgtgcggacagtgctcctgccatgggaatgagttcggtcag
gtctggggaaagtactgcgaatgtgacgacttcaactgcttgcgcttcaagggggcactg
tgctccgatcatgggaagtgcagctgtgggctctgccagtgcgacgcgggctggaaagga
gagaactgcaactgcagcacagtcgtagacacctgcatgtccagcatcggcctgctgtgc
agcggccgcggtagctgccagtgtggcgtctgtcagtgcacccagcctggtgcctacgga
gacacctgtgagaaatgccccacttgtccagatgcctgcacaatcaaaaaggagtgtgtt
gagtgccaacacttcaagagaggacagtacatcgaagacaacagctgcagtataatctgc
aaaaatgagattaatttagtggaggaactgggtttccatgcaaacgcagtgaattgctca
tacaaagatgagaacgactgcgtggtacacttccagtattacgaagatggaagcggaaaa
tccattctggatgtggtcaaagagccagagtgtcctcagggtgcagacattttggtggtg
ctcctggcggtggccggagctattctgctgctgggcctcattgggatgctcatctggaag
ctgctagtcaccatccatgaccgcagagagttcgtcaagtttgaagaggagaaagccaaa
gccaagtgggacacggctaacaatcctttgtacaaggaagccacctccaccttcaccaac
gtggcataccggggcaactaa
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