Gasterosteus aculeatus (three-spined stickleback): 120828449
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Entry
120828449 CDS
T07457
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein
KO
K09191
general transcription factor IIIA
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120828449 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
gat03021
]
120828449 (si:dkey-208k4.2)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120828449 (si:dkey-208k4.2)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
120828449 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-C2H2_8
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
120828449
NCBI-ProteinID:
XP_040047961
UniProt:
A0AAQ4NNV3
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All DBs
Position
XI:6809794..6812657
Genome browser
AA seq
373 aa
AA seq
DB search
MNGVHSGEADCGPSLQLRNCTHAGCGATFTRDWRLKEHETVHTGERPCLCAIAGCGRRFT
RISHLRRHMLKHRGVKHFQCNFLNCTQSFFHAGHLKRHVRYAHGDKNKYFKCDQPDCTLT
FKKRRAFKLHLQEHEVVVKSKCSTEGCVAMFDSHVARKAHEKKHAGYRCPRANCQVLEHT
WGKLKKHMAKHSATFTCQACKKVFKKAEALRRHKRIHASHKPVLVCPREDCHAYFSTTFN
LQHHIRKVHLELLKYKCSFPDCPRMFAMRESLTRHLLRHDPSATTLKKRKRTKKTWQKRL
DGHHLPRVEEDLRSLFALRMRISRRAKVEMNLAGLFNERKIPHYVDTEVNLRSLFGIKQP
RFVEEPVVLSLEG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgttcacagcggggaagcggactgcggtccgtcgctgcaactgcgcaactgc
acccacgcgggctgcggcgcgacgttcacccgagactggaggctgaaagagcacgagacg
gtgcacactggggagcgcccgtgtctctgcgccattgccggctgcggtcgtcgtttcacg
cgtatctctcatctgaggcgccacatgctgaagcacagaggggtgaagcacttccagtgc
aactttttgaactgcacgcagagttttttccacgcgggccacctaaaaagacacgtgcgc
tacgcccacggagacaagaacaagtatttcaagtgtgaccagccagactgcacattgacc
ttcaaaaaacgcagagcgtttaaactgcacttgcaggagcatgaagtggttgttaagtca
aagtgttcgacggaaggatgcgttgccatgttcgactcccatgttgctcgcaaagcacac
gagaagaagcatgcaggttaccgctgcccccgagctaactgccaggtgttggagcacacc
tggggcaaacttaagaaacacatggccaaacattcagccacatttacatgccaagcatgt
aagaaggtgtttaagaaggctgaggctctgaggaggcacaaacgaatccacgcctcccac
aagcccgtgctcgtatgtcccagggaggactgccatgcctacttctcgaccacctttaac
ctgcagcaccacatccgcaaggtgcacctggagctcctgaaatacaaatgttccttcccg
gactgcccacgcatgtttgctatgagagagagtttgaccagacacttgcttcgccatgac
ccaagtgccaccaccctgaagaaacgtaagcggaccaaaaaaacctggcagaagcgtctg
gacggacaccatctgccccgtgtggaggaagacctgcgcagcctctttgctctgcgcatg
cggatctcccgacgcgccaaggtggaaatgaacctcgcgggactcttcaatgaacgcaag
atccctcattatgttgacacggaggtcaacctgcgcagcctgtttggaatcaaacagccc
cgctttgtggaggagccggtggttctgtcactagaaggttga
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