Gasterosteus aculeatus (three-spined stickleback): 120828471
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Entry
120828471 CDS
T07457
Name
(RefSeq) cysteine protease ATG4D-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04136
Autophagy - other
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120828471
04136 Autophagy - other
120828471
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120828471
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120828471
03029 Mitochondrial biogenesis [BR:
gat03029
]
120828471
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120828471
Membrane trafficking [BR:
gat04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120828471
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120828471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
120828471
NCBI-ProteinID:
XP_040048000
UniProt:
A0AAQ4QAJ6
LinkDB
All DBs
Position
11:4106880..4113034
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AA seq
466 aa
AA seq
DB search
MNPNDASAHCEDNSSPDDPMDDWLFLSTDSAVRPGPEVSGENLETEDRGPLKTKLISVWN
SVKYGWSLKHKSKFSKSSAVIMFGQSYELRDHDERENFRRSFASVLWLTYRRGFPQLAGG
SLTTDSGWGCVLRTGQMLLAQGLIRHQVPPGCTRCVGYHAVKDDLDLLAICPAAAAERGL
DAKEGPNKFGRHLSLDSLMDRPKEAHLRRVVSWFADSPTAPFGIHKLVELGKSSGKKAGD
WYGPSIVAHILRKAVAASADLPDLVVYVAQDCTVYLEDVKRLCERPLSQPWKAVIILVPV
RLGGQDLNPSYVTCVKKLLSLQCCIGIIGGKPKHSLFFIGFQDDHVLYLDPHYCQPAVDV
TRENFPLESFHCKYPRKMSFCRMDPSCTIGFYAKGQKDFEALRTDVNQALSISAETYPMF
IFAEGSSQEEEQGGTHVFQNNIAYIQRKTERRRVDTCNSMDEFVLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaacgacgcctcggctcactgtgaggacaactcgtcaccggacgacccgatg
gacgactggctcttcctctccaccgactctgccgtccgcccgggcccagaggtgagcggg
gagaacctggagaccgaggaccgaggcccactcaaaaccaagttgatctctgtgtggaac
agcgtcaaatatggctggtccctgaagcacaaatccaaattcagcaagagctctgctgtg
atcatgttcggacaatcctacgagctccgggatcacgatgagagggagaacttccgccgc
tccttcgcctccgtcctctggctgacgtacagacggggtttccctcagctggccggcggc
tctctgaccaccgacagcggctggggctgcgtgttacgcacgggccagatgctgctggct
cagggcctaatccgccaccaggtgccaccaggttgcactcggtgtgttggctaccatgcg
gtcaaagatgacctggacctcctagcgatttgccccgcggccgccgcagagcgcggactg
gacgcaaaggaagggccgaataagttcggtcgacacctgagcttggattccctcatggac
cggcccaaggaggcccatctgaggagggtggtgtcgtggttcgcggactctcccacggcc
cccttcgggatacacaagctggtggagctgggaaaaagctcagggaagaaggccggcgac
tggtacggcccctccatcgtggcacacatcctccggaaagcagtggcagcatcagcggac
cttcccgatctagtcgtgtatgtcgcacaagattgcaccgtctacttggaagacgtgaag
aggttgtgcgaacggcctctgtctcagccctggaaggccgtcatcatcctggttcctgtg
cgacttggaggacaagatctcaacccctcctacgtcacctgtgtgaaaaaactgttgagt
ttgcaatgctgcattgggatcatcgggggcaaacccaagcactccttgttcttcatcggc
ttccaggatgaccatgtgctgtacttggaccctcactactgtcagcctgcggtggatgta
accagggagaactttcccttggagtcctttcactgtaaatatcccaggaaaatgtctttc
tgtcgcatggaccccagctgcaccatagggttctatgccaaaggccagaaggactttgaa
gccctgcgcacagacgttaaccaggctctctccatatcggcagagacgtaccccatgttc
atctttgctgaaggaagcagtcaggaggaggaacagggagggacccacgttttccaaaac
aatatcgcgtatatccagaggaagactgaacggagaagagtcgacacgtgcaacagcatg
gacgagtttgttctgctgtga
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