Gasterosteus aculeatus (three-spined stickleback): 120828768
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Entry
120828768 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120828768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120828768
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120828768
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120828768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
F36G3_coil
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
120828768
NCBI-ProteinID:
XP_040048275
LinkDB
All DBs
Position
1:23368492..23406545
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AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGVPLPLPAPHSGPNSPGEEGSDRLAL
VPFSAAMSGPITPPEPIQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLTNLIKRNNELESLMGKMIQTCQHVEVNASRQEGKLLEECDVLIEIIQQRRQII
GNKIKEGKAHRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MANASTQVLIPEIHLTDTFDTVALDFTREKKLLENLDYLTAPSAPCIREELCTASYDTIS
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGCVTFYDAVSSQHLHTFHVSFAQPVCPV
FNVWNKCLTILTGLPIPDHLEGQEPEN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctttttgaagaccca
ctactgctcccctgcgctcacagcttgtgtttcggctgcgcccatcgcatcctcatctcc
cactgcgccaccaacgagtccgtccagagcatcggcgccttccagtgtcccacctgccga
tatgtcatttccctgagccccgagcgcggactagaaggacttaagcgaaacgtcaccttg
cagaacattatcgatcgagttcagcgggcctcatcttcggccggggtgcccctgccgctg
cccgcgccccacagcgggcccaactctcccggcgaggaagggagcgaccggctggcgctg
gtcccgttcagcgccgccatgtccggcccgatcacgcctcctgagccgatccagtgccag
ttctgcgagcaggacccgccgcaggacgccgtcaaaacgtgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctcagggccacgcacccgaacaagaagccgttcaccggccaccgg
ctcatcgagcccatgccggactcccacctcagggggcttcagtgcctggagcacgacgag
gagaaggtcaacatgtactgtgtcacggacgatcagctcatctgctcgctgtgcaagctg
gtggggaggcacagagaccaccaggtggcggcgctgagcgaccgctacgagaaactcaag
caagccctggactccaacctcaccaacttgatcaagaggaacaacgagctggagtctctt
atggggaaaatgatccagacatgtcaacatgtagaggtgaacgcatcccgccaggagggc
aagctcctggaggagtgcgacgtgctgatcgagatcatccagcagaggaggcagatcatc
ggcaacaagatcaaggaggggaaggcgcataggatccgcaagctcgcccaacagatctcc
aactgcaagcagtgcatcgagaggtcctccgccctcatcacgcaggccgatcagacgctg
aaggaaacagaccacgctcgcttcctgcagaccgcaaagagcatcaacgagagggtttcc
atggcgaatgcatccacccaagtgctgattcctgagatacacctaacggacacctttgac
acggtggccctggacttcaccagggagaagaagttgctggagaatctggattacctcaca
gctccaagcgctccgtgcataagggaagagttgtgcacagcttcgtacgacaccatctcc
gtgcactggacgtctgatgacgagttcaccgtggtgtcctatgagctccagtacgccatc
ttcactgggcagtctaacattgccagtctgtgcaactcattggagagctggatgattgtt
cccaacatcaagcagaaccactacacggtgcacggcctgcagagcgggacaaagtacatc
tttgtcgtcaaggccatcaaccaagcgggaagccggagcagcgaaccggggacgctgaag
accaacagccagccgtttaagttggaccccaaatcggcccacaagaagctgaaggtgtcc
cacgacaatctgacggtggagcgggacgagaccacatccaagaagggccacagccaggag
cgcttcaccagccagagcagctacggcgtggtggggaacgtctacatcgacagcggccgt
cactactgggaggctctgatcggagggagcacgtggtacgccgtgggcatagcctacaaa
tcggcccccaagcacgagtggatcggcaagaactcggcctcctgggtgctctgccgctgc
aacaactcctgggtggtccgccacaacagcaaagagctggccatcgagccctcgccccac
ctgcggcgcgtcggcgtcctgctggactacgacgccggctgcgtgaccttctacgacgcc
gtgagctcgcagcacctgcacaccttccacgtgtccttcgcccagcccgtgtgtcccgtg
ttcaacgtgtggaacaagtgtctgacgatcctcaccggcctgcccatccccgaccacctg
gaggggcaggagcccgaaaactga
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