Gasterosteus aculeatus (three-spined stickleback): 120828840
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Entry
120828840 CDS
T07457
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120828840 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120828840 (nfascb)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
L1 family
120828840 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
V-set_CD47
BiPBP_C
DAG1
DUF3792
Motif
Other DBs
NCBI-GeneID:
120828840
NCBI-ProteinID:
XP_040048408
UniProt:
A0AAQ4NPZ5
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Position
XII:4344452..4355926
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AA seq
1179 aa
AA seq
DB search
MGTLVEPALLLLLWQSVWALDVPLEIRQPPTIIKQSMKDHIVDPKDTMVIECEAKGNPHP
IFSWRRNGKYFNVARDTQVSMRRRSGTLDIYAWNNPEQYEAEYQCIASNAYGSAYSNKIR
LRLYRAPVWPREVLEPLVVSAGLPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPVQTAV
PTMHPVRPDRRVSMGINGDLYFSNVQFNDSAADYCCNARFPYKNVIQQKMPVVVKVLTIR
TVAEAAPTWLSPTGSSSSILVLQGEELLLECIAAGVPTPRIAWTKNGDDLGASPRIKVKN
FNKMIQIQKASFDDVGEYTCTATNKIGYIEHTVTVRVKAAPFWLEKPTDLVLAPEENGRL
LCQSDGAPRPTVSWFINGEPIEVATPQPNRQVSGDTLTLRAVTAENTAVYQCNVSNEFGY
LLANAFVNVLHATPRILGARNELIKVIEGSRPLLDCRYFGSPVPELRWSKYGQGTLEGNR
FKTHRNGTLEIKQIRIEDQGTYLCVVSNVAGRDESQVRIEVKEPTLIVTRPQSMKVIRGS
DVRFECGVKTDVTTPVTTTWMKDKKHVTLGWRISLDESNLVITNANRGDEGNYTCVIKSE
MEQKSASARLMVMDRPDPPTKLELSDPYERSVRLRWVPGESNHNPITEYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLTPFTYYEFRVIAINEIGMSRPSRPSTRFQSSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTYRQWNGPHLKYLVWWKRRDSREEWKNATTKWLKYYIYDAD
TFTPYDIKVQAVNDFGLGPESPVVTGYSGEDRPLTAPLNLRVSDIESTQVTLHWDSVTRG
SMMGELKEYKAYYWRDSSQLGWLRVNRGMKSKAYPDNHPEPSGVLTGLVPYSNYKLYIVV
ANNRYEGPPSNNIVFSTPEGVPSAPRSFRIQQRHLDSIYVDWDLPAEPNGVITGYSLKYQ
TMNATRGEESRVEELTPNVTSFSVRRFDRYTRYRFSVAAQTRIGTGEWHTEESPHYTTET
YAQDQVDITTQGWFIGIMCAVALMVLILLIVCFIKRSRGGKYPVREKKDISMEPVDDKDQ
EGSFDYRSLERIARISTLPYPRREEERGLQRGQSSMEAMMKRSDSDDSLVDYVEGSEIPF
NEDGSFIGQYTGTRRDVRELDFGGTLELHSSVNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggactctggtcgaaccagctctgctgcttcttttatggcagagtgtttgggctttg
gacgtccctctggaaatcaggcagcctccgaccatcataaagcagtcgatgaaggaccat
attgttgaccccaaagacaccatggtcatagaatgtgaagccaaaggaaaccctcatccc
attttctcgtggagacggaatgggaaatatttcaacgtggcacgtgatactcaagtttca
atgcgccggcgttcggggaccctggacatctatgcctggaacaatccggagcagtatgag
gccgagtatcagtgcattgcctccaacgcgtacggatctgcatactccaacaagatccga
ctgcggctatacagagctcctgtttggccaagggaagtcctggagccgctggtggtcagc
gctggcttgcctctggtcctgtcttgtgacccgccaccaggccctccgaaacctgaaacc
tactggatgtccagctgctcctacgcgaggccttttaactggccggttcagacagctgtc
cccaccatgcaccctgtgcggccggaccgcagggtatccatgggaataaacggagatctg
tatttctctaacgtccagttcaatgactctgctgccgattactgctgcaatgcccgcttc
ccctacaagaacgtcatccagcagaagatgccagtggtggttaaggtgctgacgattcgc
acggtggccgaggctgcccccacctggctgtctcccacaggctcgtccagctccatactg
gtcctgcaaggggaggagctgctcctggagtgcatcgctgcaggagtgccgactcctcgt
attgcatggaccaagaatggtgacgacctgggggcatcgccgcgcattaaagtaaagaac
ttcaacaagatgattcaaatccaaaaggcgtcctttgatgatgtgggtgaatacacttgc
actgctaccaataagatcggatacatcgagcacacagtaaccgtcagggtcaaagcggct
cccttctggctggagaaacccaccgatctggtcttggccccggaggaaaatggacgcctc
ttgtgtcaatcggatggggccccgcgtcccacagtcagctggttcatcaacggagaacct
attgaagttgctacacctcagcctaacagacaagtgtcgggagacacactgaccttacgc
gctgtgaccgctgaaaacactgcagtctatcagtgcaacgtttccaacgagtttgggtac
ttactggccaacgcgtttgtcaacgtgctacacgcaacaccacgtattctgggggccagg
aatgaactcatcaaagtgatcgagggtagtcgtcccctcttagactgccgctactttggt
tctccagtacctgagttgcgatggtccaaatacggacagggtacccttgaagggaatcgt
tttaagacccaccgtaacgggactctggagatcaaacaaatacggatagaagatcaggga
acatacctgtgtgtagtcagcaacgtcgcaggaagagatgagagtcaagtccggatagag
gtcaaagagcccactttgattgtcacgagaccgcagagtatgaaagtcatccgcgggagc
gacgtgcgctttgagtgtggtgtaaaaacggacgttactactcctgtcacaaccacctgg
atgaaagacaagaagcatgtcacccttggctggaggatttctctggatgaatcgaatcta
gtcatcaccaatgcaaacagaggcgatgagggtaattacacctgtgtcatcaagagtgag
atggagcagaagtctgcctcggcacgtctcatggtgatggaccgtccagatcctcccacc
aagttggagttgtccgatccatatgaacgcagtgtaagactccgttgggtacctggagaa
agcaaccacaaccctataacagagtacttagtgcagtacgatgatgatgactggttgccc
ggtaagtggagaaacctctcaacgtatccggggaacctcaactctgtcatcctgcatctc
acacctttcacctactacgagtttcgggtaatcgctatcaatgaaatcggaatgagtcgc
cccagtcgtccgtctacacgcttccagagcagcggtgctcccccagatgtcattccaaag
aacgtcaaaggggtgggcacatggaggaataacatggagatcagctgggagccgctgacg
tacagacagtggaacgggccccacctgaagtatttggtgtggtggaaaaggagagattcc
cgagaggagtggaagaacgcgaccactaaatggttaaagtactacatctacgatgcagat
accttcactccgtatgacatcaaagtccaggctgtcaatgattttggattgggtccagag
tcccctgttgtcaccggttactccggggaggaccgtcccttaacggcccccctgaacctg
agagtgtccgacatcgagagcactcaggtgacgttgcactgggattcagtgacacgcggc
tcaatgatgggggaactgaaagaatacaaggcctactactggagggacagcagccagctg
gggtggctgagggtcaatagaggaatgaagtccaaagcgtatccagacaatcatccagaa
ccctcgggagttctcaccgggctcgtcccgtacagcaactacaagttgtatatagtcgtg
gcaaacaatcgatacgaagggccgcccagtaataatatcgtcttctcaacgccggaagga
gtaccatctgctcccagatcattcaggatccaacagagacacctggacagcatttatgtc
gactgggaccttccggccgaacccaacggtgtcattaccggatattccctgaagtaccag
acaatgaacgccaccaggggagaggagtcgcgggtcgaggagctcactccaaacgtaaca
agcttctcggtccggcggttcgaccgctacactcgttacagattctccgtggcggcacaa
actcgcatcgggacgggggaatggcacactgaggagtcaccccactacaccactgaaacg
tacgcgcaggaccaggtggacatcaccactcaggggtggttcatcgggatcatgtgtgcc
gtagctctcatggtgctcatcctactcatagtctgcttcatcaagaggagccgagggggg
aaatacccggtgcgggaaaagaaagatatttccatggagccggtggatgacaaagatcag
gaagggtcgtttgactacaggtctcttgaaaggatagcacgtatctccaccctgccctac
ccacggcgagaggaggaaagggggcttcaaagaggccagtcgtccatggaggctatgatg
aagcggtccgacagcgacgacagcctggtagactacgtcgagggaagcgagataccgttc
aacgaggacggctcgttcatcggccagtacacaggaaccaggagagacgtcagggagttg
gactttggtgggacactggagctccactcgtcagtgaataccatctactcgctggcgtaa
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integrated database retrieval system