Gasterosteus aculeatus (three-spined stickleback): 120828855
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Entry
120828855 CDS
T07457
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120828855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120828855
03036 Chromosome and associated proteins [BR:
gat03036
]
120828855
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120828855
Coactivators
SAGA/TFTC/STAGA complex
120828855
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120828855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
Motif
Other DBs
NCBI-GeneID:
120828855
NCBI-ProteinID:
XP_040048443
LinkDB
All DBs
Position
XII:complement(2905854..2914748)
Genome browser
AA seq
930 aa
AA seq
DB search
MLFGGPIKAPAKAASSESAPNRRMRLRGDRSWAKMAAGSDLLDDVFFNTEVDEKVVNDLV
GSLESELTGERRVNAATDVQVTSNHAGNPAVGRNSNVQGSKMGLSQQELAKAGTGGRGGV
ISSTGSGGSSVDGAAGTTSSVTAAQSPSKPGTLNGSAVVVTCHITGNNNHHHSSTSSSPQ
PAAPLINNGPVSVSKASTAASAATPTAIIKTSPVSAPNAAGCAPTVTLARPPMQTPANAS
RGGGGDDAALTSPAVGVNKLDPAKGAMQIAARSPSVLQNPRPSLAPPGGTRAIAPQVLAP
RLTQPQQATPNIQNIQLPPGMVLVRSESGQLLVIHQQTLAQMQAQSQSQSAMTPRAAAPT
STPPVQIASLQAPGASPLARPVAPTAIIKQGSAVQATVTPTTTLQRPPILQNTIVLGGAA
PAPGQPLGTPTPVQAGPAATQRATGTPVTPTAVTAETLENVKKCRNFLSTLIKLASSGKQ
SSETIANVKELVKNLLEAKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQMTPDSE
SFIQQSLLPQPAAATSTALTAVVLRPPVSTASSSPAATKTTVISLTQTPPSKPALQHGTL
VRPQVALAQSPMGTLRGQPHSRIVVSHPQVVKQQPTAMKQTLAQGAKGLQVVSQASLIAA
QRNKLKEAGGGTFRDDDDINDVASMAGVNLSEESDRILATNSELVGAVTRSCKDEAFLST
ALLARRALEIGRKFGVSELGPDAANFIAHATQQRLRHLLERVSLVAQHRNGTFKEDERCE
QASDVRTQLRFFEQLDQMEKQRKEEKEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQE
LAQIRQREANLTALAAIGPRKKRKMDSPVRGASAEGSGPGPCQPGGSGGSGSRQFTRQRI
TRVNLRDLLFCLENERGTSRSHLLYRGFLK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgttattcggaggaccaatcaaagcgcccgccaaggccgcgtcatcggagagcgcaccc
aatcggcgcatgcgtctcaggggcgatcgcagctgggcaaagatggcggcgggctccgat
ttgctggatgatgttttcttcaacacagaggtggacgaaaaagtagttaatgatcttgtc
ggatctctggagtccgagctaacgggagagaggcgagtaaacgcagcgaccgacgtccag
gtgacgtcaaatcacgccggaaaccccgctgtaggtcgcaactctaatgttcagggcagc
aaaatgggactttcacaacaagagcttgccaaagcagggaccggagggcggggaggtgtc
ataagcagcacggggtccggcggttcgagcgtggacggagcggccgggaccacgtcgagc
gtgacagccgctcagagtccgtctaagccggggactttgaatggaagtgctgttgtggtg
acctgtcacatcaccggcaacaacaaccaccaccactcctccacctcctcctccccccag
cccgccgcccccctcatcaacaacggacctgtatctgtgagcaaagcaagcacagcggcg
tccgccgcaacaccgactgctatcatcaaaacttccccggtgagcgcgccgaacgccgcc
gggtgcgcgcccaccgtcactctggcgaggccgcctatgcaaactcccgccaacgcctcg
cgcggcggcggcggcgacgacgcggcgctgacgtcaccggcggtcggcgtcaacaagttg
gacccggcgaagggcgcgatgcagatcgccgcgaggagcccgtccgtgctgcagaacccg
aggccgtcgctggctccccccggcggaacacgagccatcgctccgcaggtgttggctcct
cgactcacgcagccgcaacaggccacgccgaacatccagaacatccagctgcctccaggc
atggtcctggtacgcagtgagagcgggcagctgctggtgattcaccagcagaccttggct
cagatgcaggcacagtcgcagtcgcagagcgccatgacaccccgagcggcagcccccacc
agcactccaccggtccagatcgcgtcccttcaggctccgggggcgtcgccgctggctcgt
cccgttgcccccaccgccatcatcaaacaggggtccgctgtccaggccactgtgacgccc
accaccacattgcagaggccccctatactgcagaacaccatcgtgctgggaggcgcggcc
cccgcccccgggcagccgctgggaacgcccaccccggtgcaggccggtcctgcagccacg
cagagggccaccgggacgcctgtcactccaacagctgtcacagctgagacgctggagaat
gtgaagaaatgccggaactttctgtccacgttgatcaagctggcgtccagtggaaagcag
tcctcagagaccatcgccaacgtcaaggagctggtcaagaatctgctggaagcgaagata
gagccagaggattttaccagtaggttgtaccgtgagctcaactcctcaccgcagccgtac
cttgtgcctttcctgaagaggagcctcccagcgctgcgtcagatgaccccggactctgag
tccttcatccagcagagcctgctgcctcagcccgctgcagcgacctccacggccctcacc
gccgtggtgctgcgacctcccgtctccacggcctccagcagccccgccgccaccaaaacc
accgtcatcagcctcacgcagacacctcccagcaaacccgcgctgcaacacgggacgctg
gtgaggccgcaggtggcgctggctcagtctcccatggggaccctcagaggtcaacctcac
agccgcatcgttgtgagccacccgcaggtggtcaagcagcagccgacagcaatgaagcag
acgttggctcagggggcaaaagggctgcaagtggtcagtcaggcctccctcattgctgcg
cagaggaacaagctgaaggaagcaggaggaggaaccttcagggatgatgacgatatcaat
gacgtggcctccatggccggggtcaacttgtcggaggagagcgaccgtatcttagcaacc
aactctgagctggtcggcgcggtgactcgatcctgtaaagacgaggccttcctgtccacc
gctctactcgcccggagagctctggagatcggtaggaagttcggcgtcagcgagctgggc
cccgacgccgccaacttcattgcccacgccacgcagcagcggctacgccacctgctggag
agggtgtctctcgtggcgcagcacaggaacgggaccttcaaggaggacgagcggtgcgag
caggccagcgacgtgcggacccagctgaggttcttcgaacagctggatcagatggagaag
caaaggaaggaggagaaggagagagagatcctcctgaaggctgccaagtcccggtcgcgg
caagaagaccccgagcagctccgactgaagcagaaggccaaagagatgcagcagcaggag
ctggctcagatccgacagagggaggccaacctgacggcgctggcggccatcggcccgaga
aaaaagcggaaaatggactctcccgtccggggcgccagcgccgagggctcggggccgggc
ccctgtcagccgggaggctccggcggttcgggctccaggcagttcacgcggcagcgcatc
accagggtgaacctcagggacctgctcttctgcctggagaacgagcgggggaccagtcgc
tcccacctgctctaccgaggcttcctcaaatag
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