Gasterosteus aculeatus (three-spined stickleback): 120828959
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Entry
120828959 CDS
T07457
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03030
DNA replication
gat03410
Base excision repair
gat03420
Nucleotide excision repair
gat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120828959 (rfc2)
03410 Base excision repair
120828959 (rfc2)
03420 Nucleotide excision repair
120828959 (rfc2)
03430 Mismatch repair
120828959 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120828959 (rfc2)
03036 Chromosome and associated proteins [BR:
gat03036
]
120828959 (rfc2)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120828959 (rfc2)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120828959 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
120828959 (rfc2)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120828959 (rfc2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120828959 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
120828959 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
RuvB_N
nSTAND3
DEAD
AAA_24
AAA_19
MipZ
AAA_5
AAA_assoc_2
AAA_30
MeaB
AAA_18
ABC_tran
RNA_helicase
AAA_28
SLFN-g3_helicase
AAA_25
DNAX_ATPase_lid
NTPase_1
AAA_2
AAA_23
MCM
DUF815
FtsK_SpoIIIE
AAA_3
Motif
Other DBs
NCBI-GeneID:
120828959
NCBI-ProteinID:
XP_040048593
UniProt:
G3N5P7
LinkDB
All DBs
Position
XII:complement(484023..487220)
Genome browser
AA seq
345 aa
AA seq
DB search
MAEVEMADAGAEEASTKSSGGHHELPWVEKYRPLKLSDVIGNEETVSRLEVFAREGNVPN
VIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNERGIDVVRNKIKMFAQQKVTLP
KGRHKIVILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYS
KLTDGQVLARLQDVVEQERLAVSDDGLEAVIFTAQGDMRQALNNLQSTNSRPLGYVNSGK
RIPKCCDEPHPLLVKSMLGHCVEGDIDQAYKVVEQLWALGYSPEDIIGNIFRVCKTYQMA
EYLKLDFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggagatggccgacgcgggagctgaagaggcctcaaccaagagctccggt
ggccatcacgagctgccctgggtggagaagtaccggccgctgaagctcagtgacgtcatc
gggaacgaggagacggtgagccggctcgaggtgttcgcacgcgaggggaacgtgccgaac
gtcatcatcgcaggtcctccaggaacagggaagaccaccagcatcctgtgcctggcccgc
gcgctgctgggagcctccatgaaggacgccgtgctggagctcaacgcctccaacgagagg
gggatcgacgtggtgaggaacaagatcaagatgttcgctcagcagaaagtcacgctgccc
aaaggacgacacaagatcgtcatcctggacgaagccgacagcatgacggacggtgcccag
caggcgctgaggaggatcatggagatctactccaagaccacacgcttcgccctggcctgc
aacgcctcggacaagatcatcgaacccatccagtcgcgctgcgccgtgctgcgctactcc
aagctgacggacggccaggtgctggcgaggctgcaggacgtcgtggagcaggagcgcctg
gcggtgtccgacgacgggctggaggccgtcatcttcaccgcgcagggagacatgagacag
gctctgaacaacctgcagtccaccaactcccggcctttgggctacgtcaacagcggaaaa
cgtattccaaagtgttgcgatgagccccacccgctgctggtgaaaagcatgctgggacat
tgcgtggagggcgacatcgaccaggcatacaaggtggtggagcagctgtgggcgctgggc
tactctccggaggacatcatcgggaacatcttcagggtctgcaagacttaccagatggcc
gagtacctcaagctggacttcatcaaggagatcgggtacacgcacatgcgtgtggctgaa
ggcgtgaactctctgctgcagatggccggtctgctcggtcggctctgcagtaagacggcg
ccccctgctgccagctga
DBGET
integrated database retrieval system
