Gasterosteus aculeatus (three-spined stickleback): 120829014
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Entry
120829014 CDS
T07457
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120829014 (trpc4b)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120829014 (trpc4b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
120829014
NCBI-ProteinID:
XP_040048676
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All DBs
Position
I:complement(14083210..14091510)
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AA seq
921 aa
AA seq
DB search
MSQLYYRKADSSSYRDCIPLRIVRAESELSTLERAYLGAVEKGDYASVKQALEEAEIYFR
ININCVDPLGRTALLIAIENENLEIIDLLLSYNVHVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYQIIKLLLQRGVSIPQPHAVRCNCVE
CISGSDVDGLRHSRSRLNIYKALASSSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSRMCKQFAKDLLDQTRSSKELETILNYRDDINPLLDEITNDLARLKLAIKYCQKEF
VAQPNCQQLLASQWYDEFPGWRRRHWAGKLLTCIFIGLLFPLFSIFYIISPKSRYGLFIR
KPFIKFICHTASYLTFLLLLLLASQHIATEQNDFQGPAPTTVEWLILPWVLGFVWTEIKQ
MWDSGLEDYIDDWWNLMDFIMNSLYLATIALKIVAYAKYRGPKSRKSWEMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YDTNEGSNCKGIRCKDQNNAFSTLFETLQSLFWSVFGLISLYVTNVEPRHEFTEFVGSTM
FGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNII
PSPKSIYYSFGWIYSRLFKRSSLKRLETFETLGRRGAENVRLNHEYQEVLKHLMKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKPQGGVTPNIASSNLAYPGNSFKY
SPKFPIDEPQRKLSMFDMVAPTLQSVAGTTTNTTTTTTTSLGSSKQAQAQCSVVISCIGQ
TQNELNKNVSDAGFLRGGRLASQKYDEIYSEEDPATFGGQNPEHLQTDRGIVEVLQKVDK
TVQEIEHSCKEHLKLKIVHSN
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattacaggaaagctgacagttcgtcatacagggactgcatccctctg
cgcatcgtgcgggcggagtcggagctctccacccttgagagggcctacctgggtgctgtg
gagaagggggactatgccagcgtgaaacaagccctggaggaggctgagatctacttcagg
atcaacatcaactgcgtcgaccccctggggcgcacagctctgctaattgccatcgaaaac
gagaacctggagatcatcgacttgctgctcagctataatgtgcatgtgggtgatgccctg
ctacatgccatccgcaaagaagtggtgggggccgtggagctgctgctcaaccacaagaag
ccacgtggagaaaaacaggtcccaccaattctactggacaaacagttttcagacttcacc
ccagacatcactccgatcatcctagcagcccacaccaacaattaccagatcatcaaactg
cttctgcagcgaggtgtttccatacctcagccacatgctgtgcgctgcaactgtgtggag
tgcatttccggctcagacgtggacggcctgcgccactcgcgctcccgtcttaacatctac
aaggccctcgccagctcatccctgatcgccctctccagcgaggatccgttcctcactgcg
tttcaactcagctgggagctgaaggagctgagcacagtggagaatgagttcaagtctgag
tacgaggaactctcccgaatgtgtaaacagtttgcgaaggacctcttggaccagacgcgg
agctctaaagagttggaaacaatcctcaactatcgcgatgatatcaaccctctcctggat
gagatcaccaacgatctggcccgactgaagctggccatcaaatattgccagaaggagttt
gttgctcagcccaactgtcagcagctgctggcatctcagtggtatgacgagttcccaggc
tggaggcggcgtcactgggcaggaaaactcctcacgtgtatcttcatcggcctcctcttt
ccacttttttccatcttctacattatctctccgaagagccgctatggcttattcatccgt
aagcctttcatcaagttcatctgtcacactgcttcctacctgaccttcctcctcctgctc
ctgctggcctcgcagcatatagccactgaacaaaatgactttcaaggcccagcacccacc
actgtcgaatggctgatcctgccctgggtgcttggatttgtatggactgagatcaaacag
atgtgggatagtggtttagaagactacatcgatgactggtggaacttaatggatttcata
atgaactccttgtatcttgcaaccattgctctgaagattgttgcctatgcaaagtacagg
gggcccaaatccagaaagagctgggaaatgtggcatccgactttggttgcagaggcattg
tttgccattgccaacatcttcagctccttgcgcctcatttgccttttcacagccaactcc
cacctgggccccttacagatctcactgggccgcatgctgctggacatcctcaagttcctc
ttcatatactgtctggtgcttttagcctttgctaatggcctcaaccaactctacttttat
tatgacacaaatgagggcagcaactgcaagggtattcgttgtaaggaccaaaacaacgcc
ttctcaacgctgtttgaaacgctgcagtcattgttttggtctgtatttggcctgatttcc
ctctacgtgaccaacgtggaaccacgtcatgaattcacagagtttgtgggcagcaccatg
tttggcacgtacaacgtcatctccctagtggtgcttttgaacatgctaattgcaatgatg
aacaactcctaccagcacattgctgatcatgcagatatagagtggaagtttgcaagaact
aaattatggatgagctattttgaagaagggggcactctgccatctccattcaatataata
cccagtcccaagtcaatttattattcattcggatggatatattcccgtttgtttaagaga
tcaagtttaaaaagacttgaaacctttgaaacgttggggagacgtggggccgaaaatgta
agattaaaccatgagtatcaggaggttttgaagcacctcatgaagcgctacgtcgcagca
atgatcagagatgccaagacagaagagggactaacagaagagaatttcaaggagctcaag
caggatatctccagcttccgttatgaagtcctcggaatgatgaagggaaaacctcaaggt
ggggtcacacccaacatcgcaagctccaacttggcttaccccggaaactcattcaagtat
tctcccaaattccccattgatgaacctcaacggaagctgagcatgtttgacatggtcgcc
cccaccctgcagagtgtagctggcaccaccaccaacaccaccaccaccaccaccacctct
ttgggctctagcaagcaagcccaggcacagtgttcagttgttatttcctgcataggtcag
actcagaatgagctaaacaaaaatgtctcagatgccgggttccttcggggagggagattg
gcttctcagaaatatgatgaaatatactcagaggaagatcctgcaacatttggtggacaa
aacccagaacaccttcagactgatagagggatcgttgaagtcttgcagaaagtggacaag
accgttcaagagattgaacattcttgcaaagagcacctaaagttaaaaattgtccattcc
aattga
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